13 items (Charadrius vociferus) - STRING interaction network

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Your Input:
	N301_09588	X-ray repair cross-complementing protein 5. (697 aa)
	N301_05300	DNA ligase. (912 aa)
	FEN1	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (382 aa)
	N301_00100	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family. (700 aa)
	N301_13797	Enkurin domain-containing protein 1. (376 aa)
	N301_09246	DNA repair protein RAD50. (1312 aa)
	N301_10607	DNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator. (505 aa)
	N301_07915	Protein artemis. (660 aa)
	N301_05513	DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. (4094 aa)
	N301_00301	Non-homologous end-joining factor 1. (192 aa)
	N301_14659	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (491 aa)
	N301_05919	X-ray repair cross-complementing protein 5. (598 aa)
	N301_05757	DNA repair protein XRCC4. (288 aa)

Your Current Organism:

Charadrius vociferus

NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FEN1	N301_00100	A0A0A0B1V7	A0A0A0A8A6	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.	0.980
FEN1	N301_05300	A0A0A0B1V7	A0A0A0AYL7	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	DNA ligase.	0.911
FEN1	N301_05919	A0A0A0B1V7	A0A0A0A425	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	X-ray repair cross-complementing protein 5.	0.811
FEN1	N301_07915	A0A0A0B1V7	A0A0A0ACJ5	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	Protein artemis.	0.494
FEN1	N301_09246	A0A0A0B1V7	A0A099ZZ55	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	DNA repair protein RAD50.	0.943
FEN1	N301_09588	A0A0A0B1V7	A0A0A0AMD0	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	X-ray repair cross-complementing protein 5.	0.719
FEN1	N301_10607	A0A0A0B1V7	A0A0A0AT06	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	DNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator.	0.776
FEN1	N301_13797	A0A0A0B1V7	A0A099ZZ28	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	Enkurin domain-containing protein 1.	0.776
FEN1	N301_14659	A0A0A0B1V7	A0A0A0A008	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.802
N301_00100	FEN1	A0A0A0A8A6	A0A0A0B1V7	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	0.980
N301_00100	N301_05300	A0A0A0A8A6	A0A0A0AYL7	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.	DNA ligase.	0.863
N301_00100	N301_05513	A0A0A0A8A6	A0A0A0A9E0	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.	DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family.	0.800
N301_00100	N301_05919	A0A0A0A8A6	A0A0A0A425	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.	X-ray repair cross-complementing protein 5.	0.985
N301_00100	N301_07915	A0A0A0A8A6	A0A0A0ACJ5	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.	Protein artemis.	0.797
N301_00100	N301_09246	A0A0A0A8A6	A0A099ZZ55	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.	DNA repair protein RAD50.	0.999
N301_00100	N301_09588	A0A0A0A8A6	A0A0A0AMD0	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.	X-ray repair cross-complementing protein 5.	0.982
N301_00301	N301_05300	A0A099ZVV0	A0A0A0AYL7	Non-homologous end-joining factor 1.	DNA ligase.	0.983
N301_00301	N301_05513	A0A099ZVV0	A0A0A0A9E0	Non-homologous end-joining factor 1.	DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family.	0.965
N301_00301	N301_05757	A0A099ZVV0	A0A0A0AP34	Non-homologous end-joining factor 1.	DNA repair protein XRCC4.	0.734
N301_00301	N301_05919	A0A099ZVV0	A0A0A0A425	Non-homologous end-joining factor 1.	X-ray repair cross-complementing protein 5.	0.966