STRINGSTRING
Slin_0093 Slin_0093 Slin_2833 Slin_2833 Slin_2834 Slin_2834 Slin_2835 Slin_2835 Slin_2840 Slin_2840 Slin_2841 Slin_2841 kup-2 kup-2 Slin_2975 Slin_2975 Slin_3348 Slin_3348 Slin_3349 Slin_3349 Slin_3351 Slin_3351 Slin_3424 Slin_3424 Slin_3425 Slin_3425 Slin_3631 Slin_3631 Slin_3632 Slin_3632 Slin_3633 Slin_3633 Slin_3634 Slin_3634 Slin_3635 Slin_3635 Slin_3636 Slin_3636 Slin_5181 Slin_5181 Slin_5183 Slin_5183 Slin_5184 Slin_5184 Slin_5185 Slin_5185 Slin_5240 Slin_5240 Slin_6411 Slin_6411
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Slin_0093PFAM: Bile acid:sodium symporter; KEGG: aci:ACIAD3583 putative transporter; putative sodium/bile acid transporter family protein. (334 aa)
Slin_2833Hypothetical protein. (58 aa)
Slin_2834PFAM: OsmC family protein; KEGG: tcx:Tcr_0275 OsmC-like protein. (138 aa)
Slin_2835Hypothetical protein. (117 aa)
Slin_2840PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: gbm:Gbem_2478 major facilitator superfamily MFS_1. (415 aa)
Slin_2841PFAM: Abortive infection protein. (250 aa)
kup-2K potassium transporter; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. (650 aa)
Slin_2975PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: pin:Ping_0777 dNTP-hexose dehydratase/epimerase. (353 aa)
Slin_3348TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bba:Bd0395 Bcr/CflA subfamily drug resistance transporter. (411 aa)
Slin_3349Hypothetical protein. (165 aa)
Slin_3351Hypothetical protein. (100 aa)
Slin_3424PFAM: small multidrug resistance protein; KEGG: rbo:A1I_07125 SMR-type multi-drug efflux transporter. (106 aa)
Slin_3425Hypothetical protein. (204 aa)
Slin_3631KEGG: dal:Dalk_4210 hypothetical protein. (496 aa)
Slin_3632PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: glo:Glov_3237 major facilitator superfamily MFS_1. (422 aa)
Slin_3633PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: glo:Glov_3237 major facilitator superfamily MFS_1. (415 aa)
Slin_3634Hypothetical protein. (137 aa)
Slin_3635TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: cja:CJA_2775 sodium/glucose cotransport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (565 aa)
Slin_3636PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: glo:Glov_3237 major facilitator superfamily MFS_1. (411 aa)
Slin_5181Hypothetical protein. (274 aa)
Slin_5183PFAM: NAD-dependent epimerase/dehydratase; KEGG: rsh:Rsph17029_3699 NAD-dependent epimerase/dehydratase. (357 aa)
Slin_5184Hypothetical protein. (92 aa)
Slin_5185TIGRFAM: oligoendopeptidase, M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: hypothetical protein. (580 aa)
Slin_5240PFAM: Na+/solute symporter; KEGG: rso:RSc0463 sodium/solute symporter transmembrane protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (460 aa)
Slin_6411PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: rsh:Rsph17029_3699 NAD-dependent epimerase/dehydratase. (357 aa)
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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