STRINGSTRING
Slin_0075 Slin_0075 Slin_0133 Slin_0133 Slin_0134 Slin_0134 Slin_0135 Slin_0135 Slin_0136 Slin_0136 Slin_0143 Slin_0143 Slin_0231 Slin_0231 Slin_0298 Slin_0298 Slin_0299 Slin_0299 Slin_0396 Slin_0396 Slin_0470 Slin_0470 Slin_0471 Slin_0471 dtd dtd Slin_0476 Slin_0476 Slin_0881 Slin_0881 Slin_0882 Slin_0882 Slin_0883 Slin_0883 Slin_0884 Slin_0884 Slin_0885 Slin_0885 Slin_1627 Slin_1627 Slin_2058 Slin_2058 Slin_2078 Slin_2078 Slin_2457 Slin_2457 Slin_2751 Slin_2751 Slin_2760 Slin_2760 Slin_2854 Slin_2854 Slin_2855 Slin_2855 vapC vapC Slin_3129 Slin_3129 Slin_3130 Slin_3130 Slin_3131 Slin_3131 Slin_3132 Slin_3132 Slin_3133 Slin_3133 Slin_3317 Slin_3317 Slin_3318 Slin_3318 Slin_3319 Slin_3319 Slin_3705 Slin_3705 Slin_3706 Slin_3706 Slin_3707 Slin_3707 Slin_3708 Slin_3708 Slin_3735 Slin_3735 Slin_3736 Slin_3736 Slin_3738 Slin_3738 Slin_4162 Slin_4162 Slin_4163 Slin_4163 Slin_4164 Slin_4164 Slin_4654 Slin_4654 Slin_4655 Slin_4655 Slin_4656 Slin_4656 Slin_4657 Slin_4657 Slin_5455 Slin_5455 Slin_5456 Slin_5456 Slin_5598 Slin_5598 Slin_5599 Slin_5599 Slin_5602 Slin_5602 Slin_5685 Slin_5685 Slin_5686 Slin_5686 Slin_5687 Slin_5687 Slin_5863 Slin_5863 Slin_5864 Slin_5864 Slin_5865 Slin_5865 Slin_5866 Slin_5866 Slin_5867 Slin_5867 Slin_5868 Slin_5868 Slin_5869 Slin_5869 Slin_5870 Slin_5870 Slin_5871 Slin_5871 Slin_5872 Slin_5872 Slin_6143 Slin_6143 Slin_6169 Slin_6169 Slin_6170 Slin_6170
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Slin_0075PFAM: helix-turn-helix HxlR type; KEGG: dal:Dalk_2971 transcriptional regulator, HxlR family. (129 aa)
Slin_0133PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: dat:HRM2_00620 predicted C4-dicarboxylate transporter/malic acid transport protein. (351 aa)
Slin_0134KEGG: rsq:Rsph17025_2330 hypothetical protein. (194 aa)
Slin_0135KEGG: geo:Geob_0343 hypothetical protein. (133 aa)
Slin_0136TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mxa:MXAN_2697 HAD family hydrolase. (225 aa)
Slin_0143PFAM: conserved hypothetical protein; KEGG: mxa:MXAN_3446 acyltransferase family protein. (395 aa)
Slin_0231PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: dat:HRM2_13790 hypothetical protein. (501 aa)
Slin_0298Transcriptional regulator, HxlR family; PFAM: helix-turn-helix HxlR type; KEGG: sme:SM_b21289 putative protein, may interact with ubiquitin. (112 aa)
Slin_0299KEGG: sun:SUN_0406 hypothetical protein. (206 aa)
Slin_0396PFAM: protein of unknown function DUF403; KEGG: dat:HRM2_13800 hypothetical protein. (320 aa)
Slin_0470Hypothetical protein. (100 aa)
Slin_0471Hypothetical protein. (70 aa)
dtdD-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (150 aa)
Slin_0476PFAM: Methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; KEGG: hypothetical protein. (111 aa)
Slin_0881Transcriptional regulator, HxlR family; PFAM: helix-turn-helix HxlR type; KEGG: abu:Abu_0028 hypothetical protein. (122 aa)
Slin_0882PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: mmw:Mmwyl1_0350 short chain dehydrogenase. (262 aa)
Slin_0883KEGG: reh:H16_B1991 hypothetical protein. (107 aa)
Slin_0884KEGG: xcv:XCV2118 putative secreted protein. (322 aa)
Slin_0885Hypothetical protein. (51 aa)
Slin_1627Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: hso:HS_0935 hypothetical protein. (133 aa)
Slin_2058PFAM: helix-turn-helix HxlR type; KEGG: bpy:Bphyt_5760 transcriptional regulator, HxlR family. (136 aa)
Slin_2078PFAM: helix-turn-helix HxlR type; KEGG: cps:CPS_1319 transcriptional regulator. (141 aa)
Slin_2457PFAM: glycosyl transferase family 14; KEGG: bbt:BBta_1001 hypothetical protein. (330 aa)
Slin_2751KEGG: bpt:Bpet3506 hypothetical protein. (167 aa)
Slin_2760PFAM: protein of unknown function DUF808; KEGG: mex:Mext_1746 hypothetical protein. (305 aa)
Slin_2854KEGG: met:M446_6767 putative proteasome-type protease. (245 aa)
Slin_2855PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: scl:sce0285 hypothetical protein. (276 aa)
vapCPilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (130 aa)
Slin_3129PFAM: Protein of unknown function DUF2191; KEGG: maq:Maqu_2253 hypothetical protein. (71 aa)
Slin_3130Hypothetical protein. (396 aa)
Slin_3131Hypothetical protein. (333 aa)
Slin_3132VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (578 aa)
Slin_3133PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: tbd:Tbd_2169 hypothetical protein. (246 aa)
Slin_3317PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: azo:azo0691 metallopeptidase. (284 aa)
Slin_3318PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gsu:GSU1371 oxidoreductase, FAD/FMN-binding. (356 aa)
Slin_3319Hypothetical protein. (85 aa)
Slin_3705KEGG: hch:HCH_03153 hypothetical protein. (218 aa)
Slin_3706PFAM: GSCFA domain protein; KEGG: dat:HRM2_41550 hypothetical protein. (311 aa)
Slin_3707KEGG: hch:HCH_03153 hypothetical protein. (187 aa)
Slin_3708KEGG: hypothetical protein LOC689768. (299 aa)
Slin_3735Hypothetical protein. (60 aa)
Slin_3736Hypothetical protein. (150 aa)
Slin_3738PFAM: helix-turn-helix HxlR type; KEGG: bpr:GBP346_A3304 transcriptional regulator family protein. (131 aa)
Slin_4162Hypothetical protein. (62 aa)
Slin_4163KEGG: bte:BTH_II0398 putative lipoprotein. (155 aa)
Slin_4164KEGG: mno:Mnod_0825 alpha/beta hydrolase fold protein. (356 aa)
Slin_4654PFAM: helix-turn-helix HxlR type; KEGG: amc:MADE_01970 transcriptional regulator. (110 aa)
Slin_4655PFAM: fatty acid desaturase; KEGG: cvi:CV_1644 linoleoyl-CoA desaturase. (381 aa)
Slin_4656PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; KEGG: scl:sce2529 cyclopropane-fatty-acyl- phospholipid synthase. (301 aa)
Slin_4657PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: tgr:Tgr7_1014 transglutaminase domain protein. (289 aa)
Slin_5455Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system. (107 aa)
Slin_5456Transcriptional regulator/antitoxin, MazE; PFAM: SpoVT/AbrB domain protein; KEGG: bgl:bglu_1p0480 transcriptional regulator/antitoxin, MazE2. (85 aa)
Slin_5598Hypothetical protein. (145 aa)
Slin_5599PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: hch:HCH_03352 transglutaminase-like enzyme, putative cysteine protease. (288 aa)
Slin_5602Hypothetical protein. (148 aa)
Slin_5685KEGG: pca:Pcar_2842 UDP-glucuronosyltransferase- like protein. (382 aa)
Slin_5686PFAM: metallophosphoesterase; KEGG: bph:Bphy_2027 metallophosphoesterase. (275 aa)
Slin_5687TIGRFAM: sugar O-acyltransferase, sialic acid O- acetyltransferase NeuD family; KEGG: gur:Gura_1700 serine acetyltransferase-like protein. (210 aa)
Slin_5863Hypothetical protein. (518 aa)
Slin_5864Hypothetical protein. (141 aa)
Slin_5865Hypothetical protein. (98 aa)
Slin_5866Hypothetical protein. (112 aa)
Slin_5867Hypothetical protein. (289 aa)
Slin_5868KEGG: ccs:CCNA_00761 hypothetical protein. (85 aa)
Slin_5869Hypothetical protein. (84 aa)
Slin_5870Transcriptional modulator of MazE/toxin, MazF; KEGG: xfa:XF1862 hypothetical protein. (108 aa)
Slin_5871Hypothetical protein. (82 aa)
Slin_5872PFAM: integrase family protein; KEGG: she:Shewmr4_1694 phage integrase family protein; Belongs to the 'phage' integrase family. (433 aa)
Slin_6143Putative transcriptional regulator, ModE family; PFAM: regulatory protein LysR; KEGG: tgr:Tgr7_1573 putative molybdenum-binding protein. (114 aa)
Slin_6169PFAM: protein of unknown function DUF955; KEGG: pst:PSPTO_0275 DNA-binding protein. (392 aa)
Slin_6170KEGG: psp:PSPPH_5056 hypothetical protein. (142 aa)
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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