STRINGSTRING
Slin_0615 Slin_0615 Slin_0616 Slin_0616 Slin_0743 Slin_0743 Slin_0744 Slin_0744 Slin_0801 Slin_0801 Slin_0802 Slin_0802 Slin_0846 Slin_0846 Slin_0866 Slin_0866 Slin_0867 Slin_0867 Slin_0868 Slin_0868 Slin_0869 Slin_0869 Slin_0955 Slin_0955 Slin_0956 Slin_0956 Slin_1167 Slin_1167 Slin_1168 Slin_1168 Slin_1274 Slin_1274 Slin_1275 Slin_1275 Slin_2412 Slin_2412 Slin_2413 Slin_2413 Slin_3030 Slin_3030 Slin_3031 Slin_3031 Slin_3399 Slin_3399 Slin_3400 Slin_3400 Slin_3418 Slin_3418 Slin_3419 Slin_3419 Slin_3654 Slin_3654 Slin_3950 Slin_3950 Slin_3951 Slin_3951 Slin_4041 Slin_4041 Slin_4042 Slin_4042 Slin_4206 Slin_4206 Slin_4207 Slin_4207 Slin_4209 Slin_4209 Slin_4210 Slin_4210 Slin_4318 Slin_4318 Slin_4319 Slin_4319 Slin_4380 Slin_4380 Slin_4381 Slin_4381 Slin_4662 Slin_4662 Slin_4782 Slin_4782 Slin_4783 Slin_4783 Slin_4800 Slin_4800 Slin_4801 Slin_4801 Slin_6039 Slin_6039 Slin_6040 Slin_6040 Slin_6286 Slin_6286 Slin_6287 Slin_6287 Slin_6377 Slin_6377
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Slin_0615Hypothetical protein. (528 aa)
Slin_0616PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1063 aa)
Slin_0743Hypothetical protein. (476 aa)
Slin_0744PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1088 aa)
Slin_0801PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1116 aa)
Slin_0802Hypothetical protein. (538 aa)
Slin_0846PFAM: metallophosphoesterase; KEGG: bra:BRADO2137 phosphatase. (371 aa)
Slin_0866RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: pha:PSHAa0959 RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (211 aa)
Slin_0867PFAM: FecR protein; KEGG: pfl:PFL_0989 sigma factor regulatory protein FecR/PupR family. (372 aa)
Slin_0868PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1117 aa)
Slin_0869PFAM: RagB/SusD domain protein. (503 aa)
Slin_0955PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1079 aa)
Slin_0956PFAM: RagB/SusD domain protein. (498 aa)
Slin_1167PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1071 aa)
Slin_1168KEGG: hypothetical protein. (481 aa)
Slin_1274PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1066 aa)
Slin_1275PFAM: RagB/SusD domain protein. (460 aa)
Slin_2412PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1029 aa)
Slin_2413PFAM: RagB/SusD domain protein. (480 aa)
Slin_3030KEGG: hypothetical protein. (506 aa)
Slin_3031PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1022 aa)
Slin_3399Hypothetical protein. (531 aa)
Slin_3400PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1057 aa)
Slin_3418PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1076 aa)
Slin_3419PFAM: RagB/SusD domain protein. (521 aa)
Slin_3654PFAM: TonB-dependent receptor plug; KEGG: ccs:CCNA_00858 TonB-dependent receptor. (810 aa)
Slin_3950PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (996 aa)
Slin_3951PFAM: RagB/SusD domain protein. (491 aa)
Slin_4041PFAM: RagB/SusD domain protein. (477 aa)
Slin_4042PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1026 aa)
Slin_4206PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1023 aa)
Slin_4207PFAM: RagB/SusD domain protein. (451 aa)
Slin_4209PFAM: RagB/SusD domain protein. (456 aa)
Slin_4210PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1027 aa)
Slin_4318PFAM: RagB/SusD domain protein. (481 aa)
Slin_4319PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1071 aa)
Slin_4380PFAM: RagB/SusD domain protein. (478 aa)
Slin_4381PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1071 aa)
Slin_4662KEGG: dde:Dde_2188 hypothetical protein. (409 aa)
Slin_4782PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1144 aa)
Slin_4783PFAM: RagB/SusD domain protein. (548 aa)
Slin_4800KEGG: hypothetical protein. (498 aa)
Slin_4801PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1074 aa)
Slin_6039PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1059 aa)
Slin_6040KEGG: hypothetical protein. (483 aa)
Slin_6286PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1168 aa)
Slin_6287PFAM: RagB/SusD domain protein. (531 aa)
Slin_6377KEGG: bid:Bind_1167 hypothetical protein. (340 aa)
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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