STRINGSTRING
Slin_0657 Slin_0657 Slin_0659 Slin_0659 Slin_0660 Slin_0660 Slin_1304 Slin_1304 Slin_1781 Slin_1781 Slin_2852 Slin_2852 Slin_3022 Slin_3022 Slin_3219 Slin_3219 Slin_3222 Slin_3222 Slin_3223 Slin_3223 Slin_3224 Slin_3224 Slin_3225 Slin_3225 Slin_3226 Slin_3226 Slin_3583 Slin_3583 Slin_3584 Slin_3584 Slin_3585 Slin_3585 Slin_3752 Slin_3752 Slin_3865 Slin_3865 Slin_4277 Slin_4277 Slin_4282 Slin_4282 Slin_4417 Slin_4417 Slin_4418 Slin_4418 Slin_4895 Slin_4895 Slin_4945 Slin_4945 Slin_4946 Slin_4946 Slin_5203 Slin_5203 Slin_5230 Slin_5230 Slin_5231 Slin_5231 Slin_5340 Slin_5340 Slin_5341 Slin_5341 Slin_5393 Slin_5393 Slin_5515 Slin_5515 Slin_5521 Slin_5521 Slin_5539 Slin_5539 Slin_5600 Slin_5600 Slin_5743 Slin_5743 Slin_5950 Slin_5950 Slin_5969 Slin_5969 Slin_6385 Slin_6385 Slin_6454 Slin_6454 Slin_6621 Slin_6621
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Slin_0657PFAM: CBS domain containing protein; KEGG: pha:PSHAa0588 inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase). (222 aa)
Slin_0659Hypothetical protein. (335 aa)
Slin_0660Hypothetical protein. (223 aa)
Slin_1304Hypothetical protein. (301 aa)
Slin_1781PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: xca:xccb100_4142 TolB-like protein. (658 aa)
Slin_2852Hypothetical protein; KEGG: rso:RSc0115 putative hemagglutinin-related protein. (759 aa)
Slin_3022Hypothetical protein. (174 aa)
Slin_3219PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: hypothetical protein. (749 aa)
Slin_3222TIGRFAM: gliding motility associated protien GldN; KEGG: hypothetical protein. (352 aa)
Slin_3223TIGRFAM: gliding motility-associated protein GldM. (528 aa)
Slin_3224TIGRFAM: gliding motility-associated protein GldL; KEGG: hypothetical protein. (272 aa)
Slin_3225PFAM: protein of unknown function DUF323; KEGG: GD13538 gene product from transcript GD13538- RA. (377 aa)
Slin_3226TIGRFAM: putative membrane protein. (324 aa)
Slin_3583TIGRFAM: putative membrane protein. (313 aa)
Slin_3584PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller; KEGG: hypothetical protein; K03640 peptidoglycan- associated lipoprotein. (798 aa)
Slin_3585TIGRFAM: putative membrane protein. (324 aa)
Slin_3752Hypothetical protein. (490 aa)
Slin_3865KEGG: abb:ABBFA_000776 hypothetical protein. (822 aa)
Slin_4277PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: hypothetical protein. (488 aa)
Slin_4282Hypothetical protein. (432 aa)
Slin_4417TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (485 aa)
Slin_4418TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: noc:Noc_0395 hypothetical protein. (484 aa)
Slin_4895TIGRFAM: gliding motility-associated lipoprotein GldD. (195 aa)
Slin_4945PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller; Tetratricopeptide TPR_2 repeat protein; KEGG: hypothetical protein; K03640 peptidoglycan- associated lipoprotein. (813 aa)
Slin_4946Hypothetical protein; KEGG: MUC5B; mucin 5B, oligomeric mucus/gel-forming. (711 aa)
Slin_5203PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller; KEGG: hypothetical protein; K03640 peptidoglycan- associated lipoprotein. (668 aa)
Slin_5230PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: avi:Avi_5260 hypothetical protein. (1222 aa)
Slin_5231TIGRFAM: putative membrane protein. (343 aa)
Slin_5340PFAM: TonB-dependent receptor plug; KEGG: hypothetical protein. (814 aa)
Slin_5341Hypothetical protein. (300 aa)
Slin_5393KEGG: avi:Avi_5260 hypothetical protein. (1303 aa)
Slin_5515TIGRFAM: gliding motility-associated lipoprotein GldJ; PFAM: protein of unknown function DUF323; KEGG: hypothetical protein. (420 aa)
Slin_5521SMART: Tetratricopeptide repeat; KEGG: hypothetical protein. (607 aa)
Slin_5539Hypothetical protein. (329 aa)
Slin_5600PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller; KEGG: mxa:MXAN_6246 OmpA domain-containing protein. (537 aa)
Slin_5743Hypothetical protein. (238 aa)
Slin_5950Hypothetical protein; KEGG: mmw:Mmwyl1_0481 filamentous haemagglutinin outer membrane protein. (400 aa)
Slin_5969TIGRFAM: gliding motility-associated lipoprotein GldH. (158 aa)
Slin_6385Hypothetical protein; KEGG: gur:Gura_2036 fibronectin, type III domain- containing protein. (694 aa)
Slin_6454Hypothetical protein. (231 aa)
Slin_6621KEGG: hypothetical protein. (2541 aa)
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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