STRINGSTRING
Slin_5591 Slin_5591 Slin_5593 Slin_5593 Slin_5594 Slin_5594 Slin_5595 Slin_5595 Slin_5596 Slin_5596
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Slin_5591PFAM: Pirin domain protein; KEGG: pfl:PFL_4073 pirin family protein; Belongs to the pirin family. (286 aa)
Slin_5593Hypothetical protein. (179 aa)
Slin_5594Hypothetical protein; KEGG: mca:MCA1562 ABC transporter, permease protein. (258 aa)
Slin_5595KEGG: pap:PSPA7_1729 hypothetical protein. (241 aa)
Slin_5596PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0826 putative ATP-binding ABC transporter protein. (232 aa)
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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