STRINGSTRING
lolD lolD Slin_4617 Slin_4617 Slin_4627 Slin_4627 Slin_4628 Slin_4628 Slin_4817 Slin_4817
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lolDABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (220 aa)
Slin_4617PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein. (792 aa)
Slin_4627PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE. (795 aa)
Slin_4628PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE. (795 aa)
Slin_4817Sigma 54 interacting domain protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_1200 ABC transporter related. (208 aa)
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (14%) [HD]