STRINGSTRING
Slin_5652 Slin_5652 Slin_0638 Slin_0638 Slin_1372 Slin_1372 Slin_1378 Slin_1378 Slin_1715 Slin_1715 Slin_1928 Slin_1928 Slin_2061 Slin_2061 Slin_3009 Slin_3009 Slin_3711 Slin_3711 Slin_5304 Slin_5304 Slin_6216 Slin_6216 Slin_6604 Slin_6604
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Slin_5652PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bbt:BBta_7586 putative glycerophosphoryl diester phosphodiesterase. (301 aa)
Slin_0638PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bbt:BBta_7586 putative glycerophosphoryl diester phosphodiesterase. (287 aa)
Slin_1372PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: hypothetical protein. (252 aa)
Slin_1378Phospholipase C, phosphocholine-specific; KEGG: bmn:BMA10247_A0095 non-hemolytic phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756. (838 aa)
Slin_1715PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cak:Caul_1971 glycerophosphoryl diester phosphodiesterase. (297 aa)
Slin_1928PFAM: protein of unknown function DUF479; KEGG: avn:Avin_37780 hypothetical protein. (206 aa)
Slin_2061PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sde:Sde_2630 response regulator receiver domain-containing protein. (149 aa)
Slin_3009PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cak:Caul_1971 glycerophosphoryl diester phosphodiesterase. (289 aa)
Slin_3711KEGG: rle:pRL120718 two-component histidine kinase/response regulator motif-containing protein. (122 aa)
Slin_5304PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: zgc:56068. (422 aa)
Slin_6216TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: phosphoesterase; KEGG: bpd:BURPS668_A2873 putative lipoprotein. (911 aa)
Slin_6604PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: atc:AGR_L_1291 glycerophosphoryl diester phosphodiesterase. (289 aa)
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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