STRINGSTRING
Slin_5062 Slin_5062 Slin_5798 Slin_5798 Slin_5698 Slin_5698 Slin_5655 Slin_5655 Slin_5619 Slin_5619 Slin_5136 Slin_5136 Slin_5134 Slin_5134 Slin_4782 Slin_4782 Slin_4719 Slin_4719 Slin_4505 Slin_4505 Slin_4210 Slin_4210 Slin_4206 Slin_4206 Slin_4155 Slin_4155 Slin_3950 Slin_3950 Slin_3573 Slin_3573 Slin_3418 Slin_3418 Slin_2476 Slin_2476 Slin_2474 Slin_2474 Slin_2408 Slin_2408 Slin_2393 Slin_2393 Slin_2159 Slin_2159 Slin_1769 Slin_1769 Slin_1626 Slin_1626 Slin_0441 Slin_0441 Slin_0274 Slin_0274 Slin_0245 Slin_0245
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Slin_5062PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1037 aa)
Slin_5798PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1202 aa)
Slin_5698N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; PFAM: peptidase T2 asparaginase 2; KEGG: saz:Sama_0299 asparaginase. (340 aa)
Slin_5655PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1164 aa)
Slin_5619KEGG: scl:sce5305 hypothetical protein. (308 aa)
Slin_5136KEGG: bav:BAV0540 membrane protein. (249 aa)
Slin_5134PFAM: Abortive infection protein; KEGG: rso:RSc3402 hypothetical protein. (280 aa)
Slin_4782PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1144 aa)
Slin_4719TIGRFAM: signal peptidase I; PFAM: Peptidase S24, S26A and S26B, conserved region; KEGG: set:SEN2562 signal peptidase I; Belongs to the peptidase S26 family. (389 aa)
Slin_4505PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1046 aa)
Slin_4210PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1027 aa)
Slin_4206PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1023 aa)
Slin_4155Beta-aspartyl-peptidase; PFAM: peptidase T2 asparaginase 2; KEGG: ent:Ent638_1322 L-asparaginase. (306 aa)
Slin_3950PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (996 aa)
Slin_3573PFAM: Abortive infection protein; KEGG: gur:Gura_1619 abortive infection protein. (283 aa)
Slin_3418PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1076 aa)
Slin_2476PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1095 aa)
Slin_2474PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1095 aa)
Slin_2408TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: mxa:MXAN_7498 signal peptide peptidase SppA, 67K type. (589 aa)
Slin_2393PFAM: Abortive infection protein; KEGG: mxa:MXAN_3287 CAAX amino terminal protease family protein. (299 aa)
Slin_2159PFAM: Abortive infection protein; KEGG: csa:Csal_2373 abortive infection protein. (247 aa)
Slin_1769PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1085 aa)
Slin_1626KEGG: bav:BAV0540 membrane protein. (242 aa)
Slin_0441PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1034 aa)
Slin_0274PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1083 aa)
Slin_0245TIGRFAM: signal peptidase I; PFAM: Peptidase S24, S26A and S26B, conserved region; KEGG: glo:Glov_1621 signal peptidase I; Belongs to the peptidase S26 family. (390 aa)
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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