STRINGSTRING
Slin_2940 Slin_2940 Slin_0530 Slin_0530 Slin_0646 Slin_0646 Slin_1435 Slin_1435 msrA msrA Slin_1697 Slin_1697 Slin_1780 Slin_1780 Slin_2345 Slin_2345 msrA-2 msrA-2 msrB msrB Slin_2529 Slin_2529 Slin_2564 Slin_2564 Slin_2735 Slin_2735 Slin_3073 Slin_3073 msrA-3 msrA-3 Slin_3599 Slin_3599 Slin_3624 Slin_3624 Slin_4066 Slin_4066 Slin_4244 Slin_4244 Slin_4245 Slin_4245 Slin_4973 Slin_4973 msrA-4 msrA-4 msrB-2 msrB-2 Slin_5638 Slin_5638 Slin_5752 Slin_5752 Slin_5928 Slin_5928 Slin_6035 Slin_6035 Slin_6383 Slin_6383
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Slin_2940KEGG: geo:Geob_0673 methionine-R-sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B. (170 aa)
Slin_0530TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: afw:Anae109_1372 thioredoxin; Belongs to the thioredoxin family. (114 aa)
Slin_0646PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mxa:MXAN_1564 alkyl hydroperoxide reductase C. (184 aa)
Slin_1435PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; KEGG: xau:Xaut_2904 pyridine nucleotide-disulphide oxidoreductase dimerisation region. (452 aa)
msrAPeptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (225 aa)
Slin_1697Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. (243 aa)
Slin_1780TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: acp:A2cp1_4094 thioredoxin reductase. (323 aa)
Slin_2345PFAM: oxidoreductase molybdopterin binding; KEGG: cak:Caul_2730 hypothetical protein. (170 aa)
msrA-2Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (210 aa)
msrBKEGG: mes:Meso_0863 methionine-R-sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; Belongs to the MsrB Met sulfoxide reductase family. (167 aa)
Slin_2529PFAM: protein of unknown function DUF1223; KEGG: pla:Plav_1401 hypothetical protein. (253 aa)
Slin_2564PFAM: oxidoreductase molybdopterin binding; KEGG: ade:Adeh_0361 molybdopterin-binding oxidoreductase. (230 aa)
Slin_2735PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: bbt:BBta_4886 putative sulfite oxidase (SoxC). (415 aa)
Slin_3073KEGG: bpy:Bphyt_5395 methionine-R-sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B. (155 aa)
msrA-3Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (220 aa)
Slin_3599Hypothetical protein. (255 aa)
Slin_3624PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: pat:Patl_2874 twin-arginine translocation pathway signal. (411 aa)
Slin_4066PFAM: Thioredoxin domain; KEGG: AGAP012940-PA. (157 aa)
Slin_4244PFAM: oxidoreductase molybdopterin binding; KEGG: dac:Daci_3134 oxidoreductase molybdopterin binding. (266 aa)
Slin_4245PFAM: protein of unknown function DUF1223; KEGG: bbt:BBta_5616 hypothetical protein. (242 aa)
Slin_4973PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: cff:CFF8240_1087 thiol:disulfide interchange protein DsbD. (699 aa)
msrA-4Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (225 aa)
msrB-2KEGG: gur:Gura_4073 methionine-R-sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; Belongs to the MsrB Met sulfoxide reductase family. (135 aa)
Slin_5638PFAM: SNARE associated Golgi protein; KEGG: GI13424 gene product from transcript GI13424- RA. (223 aa)
Slin_5752TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: ara:Arad_2251 dihydrolipoamide dehydrogenase. (466 aa)
Slin_5928KEGG: mms:mma_0248 GAF domain-containing protein. (160 aa)
Slin_6035TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; KEGG: mch:Mchl_1930 dihydrolipoamide dehydrogenase. (466 aa)
Slin_6383TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: asu:Asuc_1845 thioredoxin; Belongs to the thioredoxin family. (101 aa)
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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