STRINGSTRING
Slin_4885 Slin_4885 Slin_1751 Slin_1751 Slin_3530 Slin_3530
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Slin_4885PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: gsu:GSU1650 cytochrome b/b6 complex, iron- sulfur subunit. (172 aa)
Slin_1751PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: ank:AnaeK_3259 Rieske (2Fe-2S) domain protein. (155 aa)
Slin_3530PFAM: protein of unknown function DUF152; KEGG: gbm:Gbem_3397 protein of unknown function DUF152; Belongs to the multicopper oxidase YfiH/RL5 family. (248 aa)
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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