STRINGSTRING
Slin_5755 Slin_5755 Slin_4534 Slin_4534 Slin_3946 Slin_3946 Slin_3121 Slin_3121 Slin_3036 Slin_3036 Slin_2039 Slin_2039
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Slin_5755TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: neu:NE0559 TonB-dependent receptor protein. (793 aa)
Slin_4534PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: tbd:Tbd_0909 putative TonB-dependent receptor. (779 aa)
Slin_3946PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1043 aa)
Slin_3121TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: neu:NE0556 TonB-dependent receptor protein. (809 aa)
Slin_3036PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor. (1033 aa)
Slin_2039Hypothetical protein. (558 aa)
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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