STRINGSTRING
Slin_2707 Slin_2707 Slin_2783 Slin_2783 Slin_4228 Slin_4228 Slin_4490 Slin_4490 Slin_6479 Slin_6479 Slin_5989 Slin_5989 Slin_4705 Slin_4705 Slin_0200 Slin_0200 Slin_0232 Slin_0232 Slin_1087 Slin_1087 Slin_1316 Slin_1316 Slin_1710 Slin_1710 Slin_2025 Slin_2025 Slin_4678 Slin_4678
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Slin_2707Hypothetical protein; KEGG: potential subtilisin/S8 serine protease similar to S. cerevisiae YCR045C; one of two in tandem duplication. (478 aa)
Slin_2783PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: hypothetical protein. (555 aa)
Slin_4228PFAM: Lanthionine synthetase C family protein; KEGG: mxa:MXAN_2857 putative lantibiotic modification protein. (661 aa)
Slin_4490KEGG: pat:Patl_1102 hypothetical protein. (843 aa)
Slin_6479PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: gme:Gmet_0751 peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family. (739 aa)
Slin_5989PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: hypothetical protein. (535 aa)
Slin_4705PFAM: Lanthionine synthetase C family protein. (414 aa)
Slin_0200PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: hypothetical protein. (658 aa)
Slin_0232Hypothetical protein; KEGG: GF17078 gene product from transcript GF17078- RA. (224 aa)
Slin_1087PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: saz:Sama_3558 peptidase S8 and S53, subtilisin, kexin, sedolisin. (466 aa)
Slin_1316Glutamate--cysteine ligase GCS2; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. (366 aa)
Slin_1710PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: swd:Swoo_3530 peptidase S8 and S53 subtilisin kexin sedolisin. (396 aa)
Slin_2025TIGRFAM: aconitate hydratase; PFAM: aconitate hydratase domain protein; KEGG: acnB; aconitase; K01681 aconitate hydratase 1. (755 aa)
Slin_4678PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; proteinase inhibitor I9 subtilisin propeptide; KEGG: swd:Swoo_3530 peptidase S8 and S53 subtilisin kexin sedolisin. (407 aa)
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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