STRINGSTRING
Slin_6120 Slin_6120 Slin_4538 Slin_4538 Slin_1833 Slin_1833 Slin_0448 Slin_0448
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Slin_6120KEGG: hypothetical protein. (211 aa)
Slin_4538PFAM: leucine-rich repeat protein; SMART: leucine-rich repeat-containing protein typical subtype; KEGG: hypothetical protein LOC100011554. (225 aa)
Slin_1833SMART: leucine-rich repeat-containing protein typical subtype; KEGG: hypothetical protein. (476 aa)
Slin_0448Histidine kinase; PFAM: ATP-binding region ATPase domain protein; Two component regulator three Y domain protein; Two component regulator propeller; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sde:Sde_0667 response regulator receiver domain-containing protein. (1114 aa)
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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