STRINGSTRING
Slin_6590 Slin_6590 Slin_0462 Slin_0462 Slin_0820 Slin_0820 Slin_1203 Slin_1203 Slin_1293 Slin_1293 Slin_1841 Slin_1841 Slin_2351 Slin_2351 Slin_2362 Slin_2362 Slin_2551 Slin_2551 Slin_2559 Slin_2559 Slin_2617 Slin_2617 Slin_2692 Slin_2692 Slin_2819 Slin_2819 Slin_2949 Slin_2949 Slin_3177 Slin_3177 Slin_3233 Slin_3233 Slin_3719 Slin_3719 Slin_3857 Slin_3857 Slin_3997 Slin_3997 Slin_4056 Slin_4056 Slin_4412 Slin_4412 Slin_4492 Slin_4492 Slin_4543 Slin_4543 Slin_5197 Slin_5197 Slin_5506 Slin_5506 Slin_6010 Slin_6010 Slin_6550 Slin_6550
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Slin_6590TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mca:MCA2232 outer membrane efflux family protein. (484 aa)
Slin_0462PFAM: outer membrane efflux protein; KEGG: mxa:MXAN_6176 outer membrane efflux protein. (451 aa)
Slin_0820TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sfu:Sfum_1456 RND efflux system, outer membrane lipoprotein, NodT family. (475 aa)
Slin_1203PFAM: outer membrane efflux protein; KEGG: dal:Dalk_4861 outer membrane efflux protein. (497 aa)
Slin_1293PFAM: outer membrane efflux protein; KEGG: gsu:GSU0828 metal ion efflux outer membrane protein family protein, putative. (442 aa)
Slin_1841KEGG: ade:Adeh_0427 outer membrane efflux protein. (438 aa)
Slin_2351KEGG: sat:SYN_01010 type I secretion outer membrane protein. (495 aa)
Slin_2362PFAM: outer membrane efflux protein; KEGG: sgl:SG0266 outer membrane channel protein. (446 aa)
Slin_2551PFAM: outer membrane efflux protein; KEGG: mca:MCA2110 outer membrane efflux protein. (422 aa)
Slin_2559PFAM: outer membrane efflux protein; KEGG: sat:SYN_01010 type I secretion outer membrane protein. (445 aa)
Slin_2617PFAM: outer membrane efflux protein; KEGG: mxa:MXAN_6176 outer membrane efflux protein. (479 aa)
Slin_2692PFAM: outer membrane efflux protein; KEGG: sat:SYN_02462 type I secretion outer membrane protein. (442 aa)
Slin_2819PFAM: outer membrane efflux protein; KEGG: cak:Caul_3306 RND efflux system outer membrane lipoprotein. (438 aa)
Slin_2949TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mfa:Mfla_0372 RND efflux system, outer membrane lipoprotein, NodT. (476 aa)
Slin_3177TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; outer membrane efflux protein; KEGG: ajs:Ajs_1849 CzcA family heavy metal efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1462 aa)
Slin_3233PFAM: outer membrane efflux protein; KEGG: afr:AFE_3265 outer membrane efflux protein. (462 aa)
Slin_3719PFAM: outer membrane efflux protein; KEGG: sat:SYN_02462 type I secretion outer membrane protein. (444 aa)
Slin_3857Hypothetical protein; KEGG: sun:SUN_1403 outer membrane efflux protein. (275 aa)
Slin_3997KEGG: lpc:LPC_0302 multidrug efflux protein, outer membrane component. (486 aa)
Slin_4056PFAM: outer membrane efflux protein; KEGG: nmu:Nmul_A1641 outer membrane efflux protein. (416 aa)
Slin_4412PFAM: outer membrane efflux protein; KEGG: cko:CKO_04427 outer membrane channel protein. (444 aa)
Slin_4492PFAM: outer membrane efflux protein; KEGG: mxa:MXAN_6487 outer membrane efflux protein domain-containing protein. (455 aa)
Slin_4543PFAM: outer membrane efflux protein; KEGG: gsu:GSU2664 outer membrane efflux protein. (430 aa)
Slin_5197TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bgl:bglu_2g03560 RND efflux system, outer membrane lipoprotein, NodT. (492 aa)
Slin_5506PFAM: outer membrane efflux protein; KEGG: gur:Gura_3409 outer membrane efflux protein. (451 aa)
Slin_6010PFAM: outer membrane efflux protein; KEGG: dal:Dalk_5050 outer membrane efflux protein. (462 aa)
Slin_6550PFAM: outer membrane efflux protein; KEGG: dac:Daci_1551 outer membrane efflux protein. (433 aa)
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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