STRINGSTRING
Slin_6449 Slin_6449 Slin_0271 Slin_0271 Slin_0456 Slin_0456 Slin_0551 Slin_0551 Slin_0582 Slin_0582 Slin_1019 Slin_1019 Slin_1024 Slin_1024 Slin_1162 Slin_1162 Slin_1249 Slin_1249 Slin_1409 Slin_1409 Slin_1422 Slin_1422 Slin_1484 Slin_1484 Slin_1747 Slin_1747 Slin_1806 Slin_1806 Slin_1861 Slin_1861 Slin_1878 Slin_1878 Slin_1945 Slin_1945 Slin_2035 Slin_2035 Slin_2247 Slin_2247 Slin_2302 Slin_2302 Slin_2353 Slin_2353 Slin_2415 Slin_2415 Slin_2521 Slin_2521 Slin_2522 Slin_2522 Slin_2630 Slin_2630 Slin_2836 Slin_2836 Slin_3580 Slin_3580 Slin_3892 Slin_3892 Slin_4029 Slin_4029 Slin_4246 Slin_4246 Slin_4520 Slin_4520 Slin_4720 Slin_4720 Slin_5005 Slin_5005 Slin_5006 Slin_5006 Slin_5014 Slin_5014 Slin_5052 Slin_5052 Slin_5524 Slin_5524 Slin_5917 Slin_5917 Slin_6048 Slin_6048 Slin_6094 Slin_6094 Slin_6381 Slin_6381 Slin_6430 Slin_6430 Slin_6608 Slin_6608
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Slin_6449PFAM: protein of unknown function DUF608; KEGG: hypothetical protein. (857 aa)
Slin_0271N-acylglucosamine 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man). (402 aa)
Slin_0456PFAM: glycosyl hydrolase family 88; KEGG: eca:ECA3559 plant-inducible protein. (462 aa)
Slin_0551PFAM: glycosyl hydrolase family 88; KEGG: rle:pRL120662 putative unsaturated glucuronyl hydrolase. (397 aa)
Slin_0582Hypothetical protein. (541 aa)
Slin_1019PFAM: glycosyl hydrolase family 88; KEGG: hypothetical protein. (393 aa)
Slin_1024PFAM: glycosyl hydrolase family 88; KEGG: hypothetical protein. (644 aa)
Slin_1162PFAM: glycosyl transferase group 1; KEGG: sat:SYN_01902 mannosyltransferase. (790 aa)
Slin_1249PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: ccs:CCNA_01029 alpha-L-rhamnosidase. (951 aa)
Slin_1409PFAM: glycoside hydrolase family 8; KEGG: scl:sce3034 endo-1,4-beta-xylanase. (432 aa)
Slin_1422PFAM: protein of unknown function DUF1680; KEGG: sde:Sde_0778 acetyl-CoA carboxylase, biotin carboxylase. (760 aa)
Slin_1484Alpha-L-fucosidase; KEGG: cja:CJA_3593 alpha-L-fucosidase, putative, afc95B. (842 aa)
Slin_1747PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: nme:NMB0390 maltose phosphorylase. (778 aa)
Slin_1806PFAM: glycosyl hydrolase family 88; KEGG: ppr:PBPRB0150 hypothetical protein. (378 aa)
Slin_1861KEGG: met:M446_5810 hypothetical protein. (892 aa)
Slin_1878Alpha-L-fucosidase; KEGG: cja:CJA_3593 alpha-L-fucosidase, putative, afc95B. (825 aa)
Slin_1945PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: hypothetical protein. (819 aa)
Slin_2035PFAM: protein of unknown function DUF1680; KEGG: hypothetical protein. (678 aa)
Slin_2247PFAM: protein of unknown function DUF255; KEGG: sfu:Sfum_2547 protein of unknown function DUF255. (700 aa)
Slin_2302KEGG: met:M446_5810 hypothetical protein. (903 aa)
Slin_2353TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: shm:Shewmr7_3384 putative alpha-1,2- mannosidase. (762 aa)
Slin_2415Hypothetical protein. (857 aa)
Slin_2521KEGG: sfu:Sfum_0673 hypothetical protein. (885 aa)
Slin_2522TIGRFAM: glycogen debranching enzyme; PFAM: Amylo-alpha-16-glucosidase; KEGG: scl:sce2296 4-alpha-glucanotransferase. (652 aa)
Slin_2630PFAM: N-acylglucosamine 2-epimerase; KEGG: hypothetical protein; K01787 N- acylglucosamine 2-epimerase. (417 aa)
Slin_2836Hypothetical protein; KEGG: ent:Ent638_3433 glycosy hydrolase family protein. (469 aa)
Slin_3580PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: hypothetical protein. (918 aa)
Slin_3892TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: pat:Patl_0130 putative alpha-1,2-mannosidase. (759 aa)
Slin_4029PFAM: conserved hypothetical protein; KEGG: xcc:XCC2893 hypothetical protein. (475 aa)
Slin_4246PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: hypothetical protein. (793 aa)
Slin_4520PFAM: glycoside hydrolase family 9; glycoside hydrolase family 9 domain protein Ig domain protein; polysaccharide deacetylase; KEGG: xac:XAC2522 cellulase. (906 aa)
Slin_4720PFAM: protein of unknown function DUF1680; KEGG: ecf:ECH74115_4952 hypothetical protein. (655 aa)
Slin_5005TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: saz:Sama_0293 putative alpha-1,2-mannosidase. (797 aa)
Slin_5006Alpha-L-fucosidase; KEGG: xac:XAC1774 hypothetical protein. (864 aa)
Slin_5014Alpha,alpha-trehalase; PFAM: glycoside hydrolase family 37; KEGG: cja:CJA_0284 trehalase, putative, tre37A. (535 aa)
Slin_5052PFAM: glycoside hydrolase family 9; glycoside hydrolase family 9 domain protein Ig domain protein; KEGG: cja:CJA_1633 endo-1,4-beta glucanase, putative, cel9B. (587 aa)
Slin_5524TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: pat:Patl_0120 putative alpha-1,2-mannosidase. (774 aa)
Slin_5917N-acyl-D-glucosamine 2-epimerase-like protein; KEGG: hypothetical protein; K01787 N- acylglucosamine 2-epimerase. (415 aa)
Slin_6048Alpha,alpha-trehalase; PFAM: glycoside hydrolase family 37; KEGG: cja:CJA_0284 trehalase, putative, tre37A. (503 aa)
Slin_6094Glycogen debranching protein-like protein; KEGG: hypothetical protein. (815 aa)
Slin_6381PFAM: N-acylglucosamine 2-epimerase; KEGG: sde:Sde_0508 hypothetical protein. (427 aa)
Slin_6430PFAM: alpha-L-rhamnosidase; KEGG: ccs:CCNA_01029 alpha-L-rhamnosidase. (757 aa)
Slin_6608Two component regulator propeller domain protein; KEGG: hypothetical protein. (753 aa)
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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