STRINGSTRING
Slin_5957 Slin_5957 Slin_4487 Slin_4487 Slin_4669 Slin_4669 Slin_4777 Slin_4777 Slin_0774 Slin_0774 Slin_0530 Slin_0530 Slin_2789 Slin_2789 Slin_4309 Slin_4309 Slin_4277 Slin_4277 Slin_6596 Slin_6596 Slin_6383 Slin_6383
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Slin_5957PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thioredoxin domain; Redoxin domain protein; KEGG: hypothetical protein. (378 aa)
Slin_4487Thioredoxin-related protein-like protein; KEGG: dat:HRM2_42220 putative thioredoxin. (196 aa)
Slin_4669PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thioredoxin domain; Redoxin domain protein; KEGG: hypothetical protein. (381 aa)
Slin_4777PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thioredoxin domain; Redoxin domain protein; KEGG: hypothetical protein. (378 aa)
Slin_0774PFAM: Vitamin K epoxide reductase; KEGG: vsp:VS_II1178 putative outer membrane protein. (400 aa)
Slin_0530TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: afw:Anae109_1372 thioredoxin; Belongs to the thioredoxin family. (114 aa)
Slin_2789PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: glo:Glov_0506 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen. (376 aa)
Slin_4309Hypothetical protein; KEGG: AGAP012940-PA. (416 aa)
Slin_4277PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: hypothetical protein. (488 aa)
Slin_6596PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: hch:HCH_02597 thiol-disulfide isomerase and thioredoxins. (202 aa)
Slin_6383TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: asu:Asuc_1845 thioredoxin; Belongs to the thioredoxin family. (101 aa)
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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