STRINGSTRING
Slin_4057 Slin_4057 Slin_0918 Slin_0918 Slin_2361 Slin_2361 Slin_2818 Slin_2818 Slin_4493 Slin_4493
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Slin_4057TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dar:Daro_2627 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (374 aa)
Slin_0918TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: nmu:Nmul_A1640 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (366 aa)
Slin_2361TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: eba:ebA1971 acriflavin resistance protein A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (372 aa)
Slin_2818TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: xcb:XC_1970 cation efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (349 aa)
Slin_4493TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: shm:Shewmr7_1150 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (367 aa)
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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