STRINGSTRING
tadC tadC tadB tadB cpaF cpaF AEI05433.1 AEI05433.1 cpaD cpaD cpaC cpaC cpaA cpaA cpaB cpaB AEI05438.1 AEI05438.1 AEI05439.1 AEI05439.1 AEI06946.1 AEI06946.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tadCFlp pilus assembly protein TadC. (325 aa)
tadBFlp pilus assembly protein TadB. (325 aa)
cpaFFlp pilus assembly protein CpaF. (489 aa)
AEI05433.1Putative flp pilus assembly protein. (420 aa)
cpaDFlp pilus assembly protein CpaD. (247 aa)
cpaCFlp pilus assembly protein CpaC; Belongs to the bacterial secretin family. (486 aa)
cpaAFlp pilus assembly protein CpaA. (174 aa)
cpaBFlp pilus assembly protein CpaB. (272 aa)
AEI05438.1Hypothetical protein. (187 aa)
AEI05439.1Hypothetical protein. (195 aa)
AEI06946.1Hypothetical protein. (600 aa)
Your Current Organism:
Oligotropha carboxidovorans
NCBI taxonomy Id: 504832
Other names: O. carboxidovorans OM5, Oligotropha carboxidovorans OM5, Oligotropha carboxidovorans str. OM5, Oligotropha carboxidovorans strain OM5
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