(36 nodes) Amino acid transport, and ABC transporter, permease network (Oligotropha carboxidovorans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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co-expression

protein homology

Your Input:
	AEI05360.1	ABC transporter substrate-binding protein. (384 aa)
	AEI05361.1	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (304 aa)
	AEI05362.1	Branched-chain amino acid transport permease; Belongs to the binding-protein-dependent transport system permease family. (380 aa)
	livG1	ABC transporter, branched-chain amino acid transport ATP-binding protein LivG. (257 aa)
	livF1	ABC transporter, branched-chain amino acid transport ATP-binding protein LivF. (238 aa)
	AEI05382.1	ABC transporter, substrate-binding protein. (397 aa)
	livH1	ABC transporter, putative branched-chain amino acid transport permease protein LivH; Belongs to the binding-protein-dependent transport system permease family. (291 aa)
	livG2	ABC transporter, branched-chain amino acid transport ATP-binding protein LivG; Belongs to the binding-protein-dependent transport system permease family. (599 aa)
	livF2	ABC transporter, putative branched-chain amino acid transport ATP-binding protein LivF. (246 aa)
	AEI05935.1	ABC transporter substrate-binding protein, putative branched-chain amino acid transport system. (424 aa)
	AEI05936.1	ABC transporter permease protein, putative branched-chain amino acid transport system; Belongs to the binding-protein-dependent transport system permease family. (293 aa)
	AEI05937.1	ABC transporter permease protein, putative branched-chain amino acid transport; Belongs to the binding-protein-dependent transport system permease family. (337 aa)
	AEI05938.1	ABC transporter ATP-binding protein, putative branched-chain amino acid transport. (268 aa)
	AEI05939.1	ABC transporter ATP-binding protein, putative branched-chain amino acid transport. (239 aa)
	AEI05988.1	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (284 aa)
	AEI05989.1	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (336 aa)
	AEI05990.1	ABC transporter ATP-binding protein. (250 aa)
	AEI05991.1	ABC transporter ATP-binding protein. (235 aa)
	AEI05992.1	ABC transporter substrate-binding protein. (426 aa)
	AEI06289.1	Extracellular ligand-binding protein. (398 aa)
	livG3	ABC transporter, high-affinity branched-chain amino acid transport ATP-binding protein LivG. (252 aa)
	livF3	ABC transporter, high-affinity branched-chain amino acid transport ATP-binding protein LivF. (238 aa)
	AEI06367.1	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (287 aa)
	AEI06368.1	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (322 aa)
	AEI06907.1	Extracellular ligand-binding receptor protein. (390 aa)
	livH2	ABC transporter, high-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family. (304 aa)
	livM	ABC transporter, high-affinity branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family. (442 aa)
	livG4	ABC transporter, high-affinity branched-chain amino acid transport ATP-binding protein LivG. (278 aa)
	livF4	ABC transporter, high-affinity branched-chain amino acid transport ATP-binding protein LivF. (244 aa)
	AEI07207.1	Hypothetical protein. (123 aa)
	livJ	Leu/Ile/Val-binding protein LivJ. (369 aa)
	AEI07353.1	Putative Leu/Ile/Val-binding protein. (393 aa)
	livF5	ABC transporter, high-affinity branched-chain amino acid transport ATP-binding protein LivF. (232 aa)
	livG5	ABC transporter, putative high-affinity branched-chain amino acid transport ATP-binding protein LivG; Belongs to the binding-protein-dependent transport system permease family. (613 aa)
	livH3	ABC transporter, putative high-affinity branched-chain amino acid transport permease LivH; Belongs to the binding-protein-dependent transport system permease family. (291 aa)
	AEI07741.1	ABC transporter, putative high-affinity branched-chain amino acid transport substrate-binding-protein. (449 aa)

Your Current Organism:

Oligotropha carboxidovorans

NCBI taxonomy Id: 504832
Other names: O. carboxidovorans OM5, Oligotropha carboxidovorans OM5, Oligotropha carboxidovorans str. OM5, Oligotropha carboxidovorans strain OM5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AEI05360.1	AEI05361.1	OCA5_c06370	OCA5_c06380	ABC transporter substrate-binding protein.	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	0.996
AEI05360.1	AEI05362.1	OCA5_c06370	OCA5_c06390	ABC transporter substrate-binding protein.	Branched-chain amino acid transport permease; Belongs to the binding-protein-dependent transport system permease family.	0.998
AEI05360.1	AEI05382.1	OCA5_c06370	OCA5_c06590	ABC transporter substrate-binding protein.	ABC transporter, substrate-binding protein.	0.595
AEI05360.1	AEI05935.1	OCA5_c06370	OCA5_c12170	ABC transporter substrate-binding protein.	ABC transporter substrate-binding protein, putative branched-chain amino acid transport system.	0.621
AEI05360.1	AEI05936.1	OCA5_c06370	OCA5_c12180	ABC transporter substrate-binding protein.	ABC transporter permease protein, putative branched-chain amino acid transport system; Belongs to the binding-protein-dependent transport system permease family.	0.813
AEI05360.1	AEI05937.1	OCA5_c06370	OCA5_c12190	ABC transporter substrate-binding protein.	ABC transporter permease protein, putative branched-chain amino acid transport; Belongs to the binding-protein-dependent transport system permease family.	0.837
AEI05360.1	AEI05938.1	OCA5_c06370	OCA5_c12200	ABC transporter substrate-binding protein.	ABC transporter ATP-binding protein, putative branched-chain amino acid transport.	0.618
AEI05360.1	AEI05939.1	OCA5_c06370	OCA5_c12210	ABC transporter substrate-binding protein.	ABC transporter ATP-binding protein, putative branched-chain amino acid transport.	0.534
AEI05360.1	AEI05988.1	OCA5_c06370	OCA5_c12720	ABC transporter substrate-binding protein.	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	0.750
AEI05360.1	AEI05989.1	OCA5_c06370	OCA5_c12730	ABC transporter substrate-binding protein.	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	0.755
AEI05360.1	AEI05990.1	OCA5_c06370	OCA5_c12740	ABC transporter substrate-binding protein.	ABC transporter ATP-binding protein.	0.682
AEI05360.1	AEI05991.1	OCA5_c06370	OCA5_c12750	ABC transporter substrate-binding protein.	ABC transporter ATP-binding protein.	0.665
AEI05360.1	AEI05992.1	OCA5_c06370	OCA5_c12760	ABC transporter substrate-binding protein.	ABC transporter substrate-binding protein.	0.491
AEI05360.1	AEI06367.1	OCA5_c06370	OCA5_c16530	ABC transporter substrate-binding protein.	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	0.605
AEI05360.1	AEI06368.1	OCA5_c06370	OCA5_c16540	ABC transporter substrate-binding protein.	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	0.689
AEI05360.1	AEI06907.1	OCA5_c06370	OCA5_c22050	ABC transporter substrate-binding protein.	Extracellular ligand-binding receptor protein.	0.632
AEI05360.1	livF1	OCA5_c06370	OCA5_c06410	ABC transporter substrate-binding protein.	ABC transporter, branched-chain amino acid transport ATP-binding protein LivF.	0.946
AEI05360.1	livF2	OCA5_c06370	OCA5_c06620	ABC transporter substrate-binding protein.	ABC transporter, putative branched-chain amino acid transport ATP-binding protein LivF.	0.812
AEI05360.1	livF3	OCA5_c06370	OCA5_c16520	ABC transporter substrate-binding protein.	ABC transporter, high-affinity branched-chain amino acid transport ATP-binding protein LivF.	0.486
AEI05360.1	livF4	OCA5_c06370	OCA5_c25110	ABC transporter substrate-binding protein.	ABC transporter, high-affinity branched-chain amino acid transport ATP-binding protein LivF.	0.832

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