STRINGSTRING
dapB dapB asd asd AEI05140.1 AEI05140.1 AEI05394.1 AEI05394.1 metH metH metF metF thrB thrB AEI05776.1 AEI05776.1 metE metE cysS cysS cysK1 cysK1 cysK2 cysK2 metC metC hom hom AEI06718.1 AEI06718.1 AEI06829.1 AEI06829.1 AEI06830.1 AEI06830.1 dapA2 dapA2 cysE cysE ahcY ahcY metK metK AEI07854.1 AEI07854.1 metX metX lysA lysA thrC thrC metZ metZ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dapBDihydrodipicolinate reductase DapB; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. (272 aa)
asdAspartate-semialdehyde dehydrogenase Asd; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (344 aa)
AEI05140.1Aspartate kinase; Belongs to the aspartokinase family. (418 aa)
AEI05394.1Methyltransferase. (505 aa)
metHMethionine synthase MetH; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1286 aa)
metF5,10-methylenetetrahydrofolate reductase MetF; Belongs to the methylenetetrahydrofolate reductase family. (301 aa)
thrBHomoserine kinase ThrB; Belongs to the pseudomonas-type ThrB family. (326 aa)
AEI05776.1Putative hydrolase/acyltransferase; Belongs to the AB hydrolase superfamily. MetX family. (352 aa)
metE5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase MetE; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. (787 aa)
cysScysteine-tRNA ligase CysS; Belongs to the class-I aminoacyl-tRNA synthetase family. (464 aa)
cysK1Cysteine synthase CysK; Belongs to the cysteine synthase/cystathionine beta- synthase family. (326 aa)
cysK2Cysteine synthase CysK. (345 aa)
metCCystathionine beta-lyase MetC. (399 aa)
homHomoserine dehydrogenase Hom. (438 aa)
AEI06718.1Aminotransferase. (405 aa)
AEI06829.1Putative CoA-binding protein. (204 aa)
AEI06830.1O-acetylhomoserine/O-acetylserine sulfhydrylase. (426 aa)
dapA2Dihydrodipicolinate synthase DapA; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (378 aa)
cysESerine acetyltransferase CysE. (274 aa)
ahcYAdenosylhomocysteinase AhcY; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. (472 aa)
metKS-adenosylmethionine synthase MetK; Belongs to the AdoMet synthase family. (397 aa)
AEI07854.1Methionine biosynthesis MetW. (217 aa)
metXHomoserine O-acetyltransferase MetX; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. (402 aa)
lysADiaminopimelate decarboxylase LysA; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (422 aa)
thrCThreonine synthase ThrC. (471 aa)
metZO-succinylhomoserine sulfhydrylase MetZ; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. (403 aa)
Your Current Organism:
Oligotropha carboxidovorans
NCBI taxonomy Id: 504832
Other names: O. carboxidovorans OM5, Oligotropha carboxidovorans OM5, Oligotropha carboxidovorans str. OM5, Oligotropha carboxidovorans strain OM5
Server load: low (14%) [HD]