STRINGSTRING
acrB1 acrB1 AEI04808.1 AEI04808.1 AEI04816.1 AEI04816.1 AEI04827.1 AEI04827.1 sdhB sdhB sdhA sdhA sdhC sdhC AEI05004.1 AEI05004.1 AEI05019.1 AEI05019.1 kdpC kdpC kdpB kdpB kdpA kdpA AEI05072.1 AEI05072.1 AEI05183.1 AEI05183.1 AEI05206.1 AEI05206.1 AEI05276.1 AEI05276.1 AEI05278.1 AEI05278.1 dapE dapE phnE phnE cysW cysW cysA1 cysA1 ccoO1 ccoO1 ccoN1 ccoN1 tolR tolR AEI05605.1 AEI05605.1 AEI05667.1 AEI05667.1 ccoO2 ccoO2 ccoN2 ccoN2 apt apt AEI05916.1 AEI05916.1 fbpC fbpC AEI05949.1 AEI05949.1 fecE fecE nasA nasA AEI05963.1 AEI05963.1 AEI05967.1 AEI05967.1 AEI05973.1 AEI05973.1 potA1 potA1 AEI06027.1 AEI06027.1 exbD exbD AEI06100.1 AEI06100.1 AEI06103.1 AEI06103.1 folK folK mdtB1 mdtB1 AEI06361.1 AEI06361.1 AEI06403.1 AEI06403.1 AEI06427.1 AEI06427.1 mdtC1 mdtC1 AEI06437.1 AEI06437.1 tatA tatA tatB tatB tatC tatC acrB2 acrB2 potA2 potA2 AEI06624.1 AEI06624.1 AEI06625.1 AEI06625.1 mdtC2 mdtC2 mdtB2 mdtB2 lolD lolD lolC lolC nuoM nuoM nuoK nuoK nuoI nuoI nuoF2 nuoF2 nuoE nuoE nuoC nuoC nuoB nuoB AEI06813.1 AEI06813.1 AEI06822.1 AEI06822.1 AEI06831.1 AEI06831.1 AEI06838.1 AEI06838.1 AEI06842.1 AEI06842.1 AEI06892.1 AEI06892.1 AEI06898.1 AEI06898.1 AEI06904.1 AEI06904.1 AEI07188.1 AEI07188.1 AEI07321.1 AEI07321.1 AEI07358.1 AEI07358.1 AEI07433.1 AEI07433.1 phaE phaE potH potH potA3 potA3 AEI07596.1 AEI07596.1 AEI07598.1 AEI07598.1 cobZ cobZ AEI07712.1 AEI07712.1 AEI07733.1 AEI07733.1 hmuV hmuV AEI07783.1 AEI07783.1 AEI07784.1 AEI07784.1 argH argH AEI07883.1 AEI07883.1 AEI07925.1 AEI07925.1 atpB atpB atpE atpE atpG1 atpG1 atpF atpF AEI07980.1 AEI07980.1 atpC atpC atpD atpD atpG2 atpG2 atpA atpA atpH atpH AEI08053.1 AEI08053.1 AEI08056.1 AEI08056.1 AEI08072.1 AEI08072.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
acrB1Acriflavin resistance protein AcrB. (1056 aa)
AEI04808.1Putative ABC transporter ATP-binding protein. (370 aa)
AEI04816.1NADH dehydrogenase (ubiquinone). (321 aa)
AEI04827.1Hypothetical protein. (810 aa)
sdhBSuccinate dehydrogenase iron-sulfur subunit SdhB; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (260 aa)
sdhASuccinate dehydrogenase flavoprotein subunit SdhA; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (604 aa)
sdhCSuccinate dehydrogenase, cytochrome b subunit SdhC. (131 aa)
AEI05004.1Putative transmembrane protein. (449 aa)
AEI05019.1Putative helicase. (1174 aa)
kdpCPotassium-transporting ATPase C chain KdpC; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex. (191 aa)
kdpBPotassium-transporting ATPase B chain KdpB; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily. (689 aa)
kdpAPotassium-transporting ATPase A chain KdpA; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. (565 aa)
AEI05072.1Hypothetical protein. (423 aa)
AEI05183.1Putative carbohydrate-selective porin. (663 aa)
AEI05206.1Hypothetical protein. (135 aa)
AEI05276.1ABC transporter, putative hemin import ATP-binding protein. (261 aa)
AEI05278.1ABC transporter substrate-binding protein. (289 aa)
dapESuccinyl-diaminopimelate desuccinylase DapE; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. (384 aa)
phnEABC transporter, phosphonate transport permease PhnE. (272 aa)
cysWABC transporter, sulfate transport permease CysW. (292 aa)
cysA1ABC transporter, sulfate transport ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (348 aa)
ccoO1Cbb3-type cytochrome oxidase, subunit CcoO. (243 aa)
ccoN1Cbb3-type cytochrome oxidase, subunit CcoN; Belongs to the heme-copper respiratory oxidase family. (540 aa)
tolRTranslocation protein TolR. (150 aa)
AEI05605.1Hypothetical protein. (105 aa)
AEI05667.1Hypothetical protein. (272 aa)
ccoO2Cbb3-type cytochrome oxidase, subunit CcoO. (243 aa)
ccoN2Cbb3-type cytochrome oxidase, subunit CcoN; Belongs to the heme-copper respiratory oxidase family. (552 aa)
aptAdenine phosphoribosyltransferase Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (179 aa)
AEI05916.1Hypothetical protein. (328 aa)
fbpCABC transporter ATP-binding protein, putative Fe(3+) ions import protein FbpC; Belongs to the ABC transporter superfamily. (366 aa)
AEI05949.1Hypothetical protein. (65 aa)
fecEABC transporter, putative Fe(3+) dicitrate transport ATP-binding protein FecE. (262 aa)
nasANitrate reductase NasA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (891 aa)
AEI05963.1Putative ABC transporter permease. (377 aa)
AEI05967.1CBS domain protein. (242 aa)
AEI05973.1Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1073 aa)
potA1Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily. (368 aa)
AEI06027.1NADH dehydrogenase-like protein Rv1812c/MT1860. (401 aa)
exbDBiopolymer transport protein ExbD. (156 aa)
AEI06100.1RND efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1027 aa)
AEI06103.1Hypothetical protein. (307 aa)
folK2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase FolK. (161 aa)
mdtB1Multidrug resistance protein MdtB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1048 aa)
AEI06361.1Putative chloride channel family protein. (435 aa)
AEI06403.1Putative permease, YjgP/YjgQ family protein. (360 aa)
AEI06427.1Small multidrug resistance protein. (109 aa)
mdtC1Multidrug resistance protein MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1064 aa)
AEI06437.1Putative NADH-ubiquinone oxidoreductase. (152 aa)
tatAtatA/E: Sec-independent protein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (78 aa)
tatBSec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. (169 aa)
tatCSec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (282 aa)
acrB2Acriflavine resistance protein AcrB. (1059 aa)
potA2Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily. (374 aa)
AEI06624.1Putative polysaccharide biosynthesis/export. (190 aa)
AEI06625.1Hypothetical protein. (470 aa)
mdtC2Multidrug resistance protein MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1035 aa)
mdtB2Multidrug resistance protein MdtB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1049 aa)
lolDLipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (231 aa)
lolCLipoprotein-releasing system transmembrane protein LolC. (423 aa)
nuoMNADH-quinone oxidoreductase subunit M. (501 aa)
nuoKNADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (102 aa)
nuoINADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (162 aa)
nuoF2NADH-quinone oxidoreductase subunit F 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (441 aa)
nuoENADH-quinone oxidoreductase subunit E 1. (250 aa)
nuoCNADH-quinone oxidoreductase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (215 aa)
nuoBNADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (198 aa)
AEI06813.1Hypothetical protein. (133 aa)
AEI06822.1Putative permease. (432 aa)
AEI06831.1Hypothetical protein. (269 aa)
AEI06838.1Putative permease YjgP/YjgQ. (385 aa)
AEI06842.1Putative acyltransferase. (645 aa)
AEI06892.1Putative porin protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (480 aa)
AEI06898.1Hypothetical protein. (182 aa)
AEI06904.1Hypothetical protein. (320 aa)
AEI07188.1Putative extracellular solute-binding protein. (404 aa)
AEI07321.1Putative ABC transporter permease. (378 aa)
AEI07358.1Chloride channel protein. (588 aa)
AEI07433.1Putative multidrug resistance protein A. (416 aa)
phaEK+/H+ antiporter subunit E, putative PhaE. (161 aa)
potHPutrescine transport system permease protein PotH. (303 aa)
potA3Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (364 aa)
AEI07596.1ABC transporter substrate-binding protein. (356 aa)
AEI07598.1ABC transporter ATP-binding protein. (261 aa)
cobZPrecorrin 3B synthase CobZ, cobalamin biosynthesis; Vitamin B12 biosynthesis. (463 aa)
AEI07712.1Hypothetical protein. (531 aa)
AEI07733.1ABC transporter, metal transport ATP-binding protein. (249 aa)
hmuVABC transporter, hemin import ATP-binding protein HmuV. (266 aa)
AEI07783.1Putative macrolide export ATP-binding protein/permease MacB. (236 aa)
AEI07784.1Putative permease. (400 aa)
argHArgininosuccinate lyase ArgH. (465 aa)
AEI07883.1HNH endonuclease domain protein. (185 aa)
AEI07925.1Hypothetical protein. (167 aa)
atpBATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (249 aa)
atpEATPase, F0/V0 complex subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (75 aa)
atpG1ATP synthase subunit b/b; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity). (187 aa)
atpFATP synthase subunit b; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (161 aa)
AEI07980.1OmpA/MotB domain protein. (464 aa)
atpCATP synthase epsilon chain AtpC; Produces ATP from ADP in the presence of a proton gradient across the membrane. (136 aa)
atpDATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (476 aa)
atpG2ATP synthase gamma chain AtpG; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (293 aa)
atpAATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (510 aa)
atpHATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. (186 aa)
AEI08053.1Periplasmic binding protein. (348 aa)
AEI08056.1ABC transporter ATP-binding protein. (267 aa)
AEI08072.1Putative polysaccharide biosynthesis/export. (211 aa)
Your Current Organism:
Oligotropha carboxidovorans
NCBI taxonomy Id: 504832
Other names: O. carboxidovorans OM5, Oligotropha carboxidovorans OM5, Oligotropha carboxidovorans str. OM5, Oligotropha carboxidovorans strain OM5
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