Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEI06320.1 | thiC | OCA5_c16060 | OCA5_c10610 | TenA/Thi-4 family protein. | Phosphomethylpyrimidine synthase ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.671 |
| AEI06320.1 | thiD | OCA5_c16060 | OCA5_c26330 | TenA/Thi-4 family protein. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase ThiD. | 0.996 |
| AEI06320.1 | thiE1 | OCA5_c16060 | OCA5_c08030 | TenA/Thi-4 family protein. | Thiamine-phosphate pyrophosphorylase ThiE. | 0.584 |
| AEI06320.1 | thiE2 | OCA5_c16060 | OCA5_c10620 | TenA/Thi-4 family protein. | Thiamine-phosphate pyrophosphorylase ThiE. | 0.675 |
| AEI06320.1 | thiG | OCA5_c16060 | OCA5_c10630 | TenA/Thi-4 family protein. | Thiazole synthase ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.651 |
| AEI06320.1 | thiL | OCA5_c16060 | OCA5_c21520 | TenA/Thi-4 family protein. | Thiamine-monophosphate kinase ThiL; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.520 |
| AEI06611.1 | adk | OCA5_c18990 | OCA5_c23090 | Hypothetical protein. | Adenylate kinase Adk; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.616 |
| AEI06611.1 | thiE1 | OCA5_c18990 | OCA5_c08030 | Hypothetical protein. | Thiamine-phosphate pyrophosphorylase ThiE. | 0.532 |
| AEI07469.1 | thiC | OCA5_c27760 | OCA5_c10610 | TenA/Thi-4 family protein. | Phosphomethylpyrimidine synthase ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.671 |
| AEI07469.1 | thiD | OCA5_c27760 | OCA5_c26330 | TenA/Thi-4 family protein. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase ThiD. | 0.996 |
| AEI07469.1 | thiE1 | OCA5_c27760 | OCA5_c08030 | TenA/Thi-4 family protein. | Thiamine-phosphate pyrophosphorylase ThiE. | 0.583 |
| AEI07469.1 | thiE2 | OCA5_c27760 | OCA5_c10620 | TenA/Thi-4 family protein. | Thiamine-phosphate pyrophosphorylase ThiE. | 0.675 |
| AEI07469.1 | thiG | OCA5_c27760 | OCA5_c10630 | TenA/Thi-4 family protein. | Thiazole synthase ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.651 |
| AEI07469.1 | thiL | OCA5_c27760 | OCA5_c21520 | TenA/Thi-4 family protein. | Thiamine-monophosphate kinase ThiL; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.520 |
| adk | AEI06611.1 | OCA5_c23090 | OCA5_c18990 | Adenylate kinase Adk; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Hypothetical protein. | 0.616 |
| dxs1 | thiG | OCA5_c11860 | OCA5_c10630 | 1-deoxy-D-xylulose-5-phosphate synthase Dxs; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | Thiazole synthase ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.537 |
| dxs2 | thiG | OCA5_c14020 | OCA5_c10630 | 1-deoxy-D-xylulose-5-phosphate synthase Dxs; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | Thiazole synthase ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.537 |
| nifS | nsrR | OCA5_c20270 | OCA5_c28150 | Cysteine desulfurase NifS. | HTH-type transcriptional regulator. | 0.954 |
| nsrR | nifS | OCA5_c28150 | OCA5_c20270 | HTH-type transcriptional regulator. | Cysteine desulfurase NifS. | 0.954 |
| thiC | AEI06320.1 | OCA5_c10610 | OCA5_c16060 | Phosphomethylpyrimidine synthase ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | TenA/Thi-4 family protein. | 0.671 |
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