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rpe rpe cysE cysE hisI hisI AEI06989.1 AEI06989.1 dapA2 dapA2 glyA glyA glnA glnA gltA gltA aroQ aroQ AEI06747.1 AEI06747.1 argC argC AEI06718.1 AEI06718.1 hom hom metC metC cysK2 cysK2 ilvD3 ilvD3 AEI06577.1 AEI06577.1 cysK1 cysK1 ilvD2 ilvD2 eno eno tpiA tpiA trpD trpD trpC trpC rsmA rsmA ybdL ybdL AEI06252.1 AEI06252.1 rpiA rpiA ttuE ttuE AEI06175.1 AEI06175.1 AEI06172.1 AEI06172.1 AEI06114.1 AEI06114.1 metE metE aroC aroC trpE(G) trpE(G) AEI05776.1 AEI05776.1 AEI05758.1 AEI05758.1 prpC prpC serA2 serA2 serC serC aroE aroE aatA aatA prs prs proC proC ilvE ilvE hisZ hisZ hisG hisG tktA tktA gapA gapA pgk pgk fbaB fbaB thrB thrB AEI05485.1 AEI05485.1 AEI05484.1 AEI05484.1 hisE-2 hisE-2 pheA pheA metH metH AEI05394.1 AEI05394.1 AEI05370.1 AEI05370.1 argB argB dapD dapD dapE dapE AEI05327.1 AEI05327.1 serA1 serA1 AEI05300.1 AEI05300.1 AEI05197.1 AEI05197.1 aroB aroB aroK aroK argJ argJ AEI05140.1 AEI05140.1 AEI05087.1 AEI05087.1 AEI05036.1 AEI05036.1 dapF dapF leuC leuC leuD leuD asd asd leuB leuB argG argG dapL dapL AEI04877.1 AEI04877.1 hisB hisB hisH hisH hisA hisA hisF hisF hisE hisE dapB dapB gpmA gpmA ilvD1 ilvD1 aroA aroA trpF trpF trpB trpB trpA trpA acnA acnA proA proA proB proB argD argD argF argF thrC thrC AEI07931.1 AEI07931.1 hisD hisD AEI07894.1 AEI07894.1 argH argH lysA lysA tyrC tyrC hisC hisC AEI07856.1 AEI07856.1 metX metX gltD gltD gltB gltB AEI07662.1 AEI07662.1 tal tal tkt tkt pyk pyk AEI07444.1 AEI07444.1 AEI07423.1 AEI07423.1 serB serB ilvH ilvH ilvC ilvC leuA leuA metK metK AEI07324.1 AEI07324.1 icd icd
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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rpeRibulose-phosphate 3-epimerase Rpe; Belongs to the ribulose-phosphate 3-epimerase family. (233 aa)
cysESerine acetyltransferase CysE. (274 aa)
hisIphosphoribosyl-AMP cyclohydrolase HisI; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. (145 aa)
AEI06989.1Putative dihydrodipicolinate synthase; Belongs to the DapA family. (309 aa)
dapA2Dihydrodipicolinate synthase DapA; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (378 aa)
glyASerine hydroxymethyltransferase GlyA; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (433 aa)
glnAGlutamate-ammonia ligase GlnA. (469 aa)
gltACitrate synthase GltA; Belongs to the citrate synthase family. (434 aa)
aroQ3-dehydroquinate dehydratase AroQ; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. (151 aa)
AEI06747.1Aspartate/tyrosine/aromatic aminotransferase. (395 aa)
argCN-acetyl-gamma-glutamyl-phosphate reductase ArgC; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (352 aa)
AEI06718.1Aminotransferase. (405 aa)
homHomoserine dehydrogenase Hom. (438 aa)
metCCystathionine beta-lyase MetC. (399 aa)
cysK2Cysteine synthase CysK. (345 aa)
ilvD3Dihydroxy-acid dehydratase IlvD; Belongs to the IlvD/Edd family. (558 aa)
AEI06577.1Putative head maturation protease. (177 aa)
cysK1Cysteine synthase CysK; Belongs to the cysteine synthase/cystathionine beta- synthase family. (326 aa)
ilvD2Dihydroxy-acid dehydratase IlvD; Belongs to the IlvD/Edd family. (574 aa)
enoEnolase Eno; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (455 aa)
tpiATriosephosphate isomerase TpiA; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (251 aa)
trpDAnthranilate phosphoribosyltransferase TrpD; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (337 aa)
trpCIndole-3-glycerol phosphate synthase TrpC; Belongs to the TrpC family. (265 aa)
rsmARibosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (282 aa)
ybdLAminotransferase YbdL. (383 aa)
AEI06252.1Phospho-2-dehydro-3-deoxyheptonate aldolase. (462 aa)
rpiARibose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (236 aa)
ttuEPyruvate kinase TtuE; Belongs to the pyruvate kinase family. (469 aa)
AEI06175.1Putative head maturation protease. (171 aa)
AEI06172.1Putative endonuclease. (95 aa)
AEI06114.1Hypothetical protein. (241 aa)
metE5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase MetE; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. (787 aa)
aroCChorismate synthase AroC; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (359 aa)
trpE(G)Anthranilate synthase. (718 aa)
AEI05776.1Putative hydrolase/acyltransferase; Belongs to the AB hydrolase superfamily. MetX family. (352 aa)
AEI05758.1Hypothetical protein. (98 aa)
prpC2-methylcitrate synthase PrpC; Belongs to the citrate synthase family. (431 aa)
serA2D-3-phosphoglycerate dehydrogenase SerA; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (529 aa)
serCPhosphoserine aminotransferase SerC; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. (390 aa)
aroEShikimate dehydrogenase AroE; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (277 aa)
aatAAspartate aminotransferase A. (400 aa)
prsRibose-phosphate pyrophosphokinase Prs; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (331 aa)
proCPyrroline-5-carboxylate reductase ProC; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (277 aa)
ilvEBranched-chain-amino-acid aminotransferase IlvE. (370 aa)
hisZATP phosphoribosyltransferase regulatory subunit HisZ. (383 aa)
hisGATP phosphoribosyltransferase HisG; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily. (325 aa)
tktATransketolase TktA; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (668 aa)
gapAGlyceraldehyde-3-phosphate dehydrogenase GapA; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (335 aa)
pgkPhosphoglycerate kinase Pgk; Belongs to the phosphoglycerate kinase family. (399 aa)
fbaBFructose-bisphosphate aldolase FbaB. (342 aa)
thrBHomoserine kinase ThrB; Belongs to the pseudomonas-type ThrB family. (326 aa)
AEI05485.1Peptidase M20 family protein. (406 aa)
AEI05484.1Diaminopropionate ammonia-lyase. (406 aa)
hisE-2phosphoribosyl-ATP pyrophosphatase 2. (133 aa)
pheAPrephenate dehydratase PheA. (288 aa)
metHMethionine synthase MetH; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1286 aa)
AEI05394.1Methyltransferase. (505 aa)
AEI05370.1Putative asparagine synthase. (598 aa)
argBAcetylglutamate kinase ArgB; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (295 aa)
dapD2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase DapD. (281 aa)
dapESuccinyl-diaminopimelate desuccinylase DapE; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. (384 aa)
AEI05327.1Putative nucleoside phosphorylase. (186 aa)
serA1D-3-phosphoglycerate dehydrogenase SerA; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (310 aa)
AEI05300.1Acyltransferase family protein. (348 aa)
AEI05197.1Putative plasmid stability protein. (148 aa)
aroB3-dehydroquinate synthase AroB; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). (388 aa)
aroKShikimate kinase AroK; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (213 aa)
argJArginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. (417 aa)
AEI05140.1Aspartate kinase; Belongs to the aspartokinase family. (418 aa)
AEI05087.1Hypothetical protein. (392 aa)
AEI05036.1Hypothetical protein. (82 aa)
dapFDiaminopimelate epimerase DapF; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (290 aa)
leuC3-isopropylmalate dehydratase large subunit LeuC; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (470 aa)
leuD3-isopropylmalate dehydratase small subunit LeuD; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (201 aa)
asdAspartate-semialdehyde dehydrogenase Asd; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (344 aa)
leuB3-isopropylmalate dehydrogenase LeuB; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. (370 aa)
argGArgininosuccinate synthase ArgG; Belongs to the argininosuccinate synthase family. Type 2 subfamily. (445 aa)
dapLLL-diaminopimelate aminotransferase DapL. (422 aa)
AEI04877.1Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. (202 aa)
hisBImidazoleglycerol-phosphate dehydratase HisB. (197 aa)
hisHImidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. (216 aa)
hisA1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HisA. (248 aa)
hisFImidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. (257 aa)
hisEphosphoribosyl-ATP pyrophosphatase HisE. (109 aa)
dapBDihydrodipicolinate reductase DapB; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. (272 aa)
gpmA2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmA; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (207 aa)
ilvD1Dihydroxy-acid dehydratase IlvD; Belongs to the IlvD/Edd family. (613 aa)
aroA3-phosphoshikimate 1-carboxyvinyltransferase AroA; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (443 aa)
trpFN-(5'-phosphoribosyl)anthranilate isomerase TrpF; Belongs to the TrpF family. (234 aa)
trpBTryptophan synthase beta chain TrpB; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (405 aa)
trpATryptophan synthase alpha chain TrpA; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (278 aa)
acnAAconitate hydratase AcnA; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (906 aa)
proAGamma-glutamyl phosphate reductase ProA; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. (428 aa)
proBGlutamate 5-kinase ProB; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. (397 aa)
argDAcetylornithine aminotransferase ArgD; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (407 aa)
argFOrnithine carbamoyltransferase ArgF; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. (311 aa)
thrCThreonine synthase ThrC. (471 aa)
AEI07931.1Putative ribosomal-protein-alanine acetyltransferase. (195 aa)
hisDHistidinol dehydrogenase HisD; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. (431 aa)
AEI07894.1Maf-like protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. (207 aa)
argHArgininosuccinate lyase ArgH. (465 aa)
lysADiaminopimelate decarboxylase LysA; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (422 aa)
tyrCArogenate dehydrogenase. (320 aa)
hisCHistidinol-phosphate aminotransferase HisC; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (364 aa)
AEI07856.1Hypothetical protein. (282 aa)
metXHomoserine O-acetyltransferase MetX; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. (402 aa)
gltDGlutamate synthase NADH/NADPH, small subunit GltD. (485 aa)
gltBGlutamate synthase large subunit. (1588 aa)
AEI07662.1Hypothetical protein. (99 aa)
talTransaldolase Tal; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family. (947 aa)
tktTransketolase Tkt; Belongs to the transketolase family. (704 aa)
pykPyruvate kinase Pyk; Belongs to the pyruvate kinase family. (478 aa)
AEI07444.1Branched-chain-amino-acid aminotransferase. (268 aa)
AEI07423.1Putative nuclease. (111 aa)
serBPhosphoserine phosphatase SerB. (297 aa)
ilvHAcetolactate synthase small subunit IlvH. (185 aa)
ilvCKetol-acid reductoisomerase IlvC; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. (339 aa)
leuA2-isopropylmalate synthase LeuA; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. (519 aa)
metKS-adenosylmethionine synthase MetK; Belongs to the AdoMet synthase family. (397 aa)
AEI07324.1Serine/threonine dehydratase. (330 aa)
icdIsocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (405 aa)
Your Current Organism:
Oligotropha carboxidovorans
NCBI taxonomy Id: 504832
Other names: O. carboxidovorans OM5, Oligotropha carboxidovorans OM5, Oligotropha carboxidovorans str. OM5, Oligotropha carboxidovorans strain OM5
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