STRINGSTRING
AEI07690.1 AEI07690.1 livF5 livF5 livG5 livG5 livH3 livH3 AEI07741.1 AEI07741.1 qseC qseC AEI07765.1 AEI07765.1 AEI07850.1 AEI07850.1 AEI07892.1 AEI07892.1 AEI07893.1 AEI07893.1 AEI07958.1 AEI07958.1 fur fur AEI04772.1 AEI04772.1 AEI04829.1 AEI04829.1 dppC1 dppC1 AEI04832.1 AEI04832.1 AEI04853.1 AEI04853.1 secB secB AEI04903.1 AEI04903.1 ftsK ftsK ffh ffh ftsY ftsY trbB1 trbB1 trbC trbC trbE1 trbE1 trbJ1 trbJ1 trbL1 trbL1 trbF1 trbF1 trbG1 trbG1 trbI1 trbI1 kdpE kdpE fur-2 fur-2 secA secA trbB2 trbB2 AEI05260.1 AEI05260.1 AEI05261.1 AEI05261.1 trbE2 trbE2 trbJ2 trbJ2 trbL2 trbL2 trbF2 trbF2 trbG2 trbG2 trbI2 trbI2 mscS mscS oxaA oxaA gsiD gsiD gsiC gsiC AEI05339.1 AEI05339.1 gsiA1 gsiA1 AEI05346.1 AEI05346.1 dppB dppB dppC2 dppC2 dppD dppD dppF dppF AEI05355.1 AEI05355.1 AEI05359.1 AEI05359.1 AEI05360.1 AEI05360.1 AEI05361.1 AEI05361.1 AEI05362.1 AEI05362.1 livG1 livG1 livF1 livF1 AEI05382.1 AEI05382.1 livH1 livH1 livG2 livG2 livF2 livF2 cpaF cpaF fadD fadD AEI05611.1 AEI05611.1 AEI05935.1 AEI05935.1 AEI05936.1 AEI05936.1 AEI05937.1 AEI05937.1 AEI05938.1 AEI05938.1 AEI05939.1 AEI05939.1 AEI05988.1 AEI05988.1 AEI05989.1 AEI05989.1 AEI05990.1 AEI05990.1 AEI05991.1 AEI05991.1 AEI05992.1 AEI05992.1 AEI05996.1 AEI05996.1 AEI06009.1 AEI06009.1 AEI06012.1 AEI06012.1 lcfB3 lcfB3 AEI06016.1 AEI06016.1 AEI06040.1 AEI06040.1 AEI06044.1 AEI06044.1 AEI06103.1 AEI06103.1 AEI06180.1 AEI06180.1 iclR iclR AEI06251.1 AEI06251.1 AEI06252.1 AEI06252.1 AEI06289.1 AEI06289.1 czcC czcC trbB3 trbB3 trbD trbD trbE3 trbE3 AEI06336.1 AEI06336.1 trbL3 trbL3 trbF3 trbF3 trbG3 trbG3 trbI3 trbI3 AEI06344.1 AEI06344.1 livG3 livG3 livF3 livF3 AEI06367.1 AEI06367.1 AEI06368.1 AEI06368.1 AEI06447.1 AEI06447.1 AEI06486.1 AEI06486.1 yajC yajC AEI06538.1 AEI06538.1 AEI06554.1 AEI06554.1 hfq hfq gsiA2 gsiA2 AEI06660.1 AEI06660.1 AEI06661.1 AEI06661.1 AEI06662.1 AEI06662.1 AEI06675.1 AEI06675.1 AEI06694.1 AEI06694.1 AEI06740.1 AEI06740.1 ribD ribD AEI06901.1 AEI06901.1 AEI06902.1 AEI06902.1 AEI06907.1 AEI06907.1 secY secY AEI07058.1 AEI07058.1 livH2 livH2 livM livM livG4 livG4 livF4 livF4 livJ livJ AEI07347.1 AEI07347.1 AEI07353.1 AEI07353.1 lcfB4 lcfB4 AEI07365.1 AEI07365.1 AEI07655.1 AEI07655.1 AEI07664.1 AEI07664.1 AEI07670.1 AEI07670.1 AEI07729.1 AEI07729.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AEI07690.1Hypothetical protein. (150 aa)
livF5ABC transporter, high-affinity branched-chain amino acid transport ATP-binding protein LivF. (232 aa)
livG5ABC transporter, putative high-affinity branched-chain amino acid transport ATP-binding protein LivG; Belongs to the binding-protein-dependent transport system permease family. (613 aa)
livH3ABC transporter, putative high-affinity branched-chain amino acid transport permease LivH; Belongs to the binding-protein-dependent transport system permease family. (291 aa)
AEI07741.1ABC transporter, putative high-affinity branched-chain amino acid transport substrate-binding-protein. (449 aa)
qseCSensor protein QseC. (444 aa)
AEI07765.1Hypothetical protein. (424 aa)
AEI07850.1Peptidase M23B. (694 aa)
AEI07892.1Hypothetical protein. (285 aa)
AEI07893.1GGDEF/EAL domain protein. (763 aa)
AEI07958.1Glycosyltransferase. (669 aa)
furFerric uptake regulation protein Fur; Belongs to the Fur family. (141 aa)
AEI04772.1Ferric-uptake regulator protein; Belongs to the Fur family. (170 aa)
AEI04829.1ABC transporter substrate-binding protein. (522 aa)
dppC1ABC transporter dipeptide permease DppC. (305 aa)
AEI04832.1ABC transporter oligopeptide/dipeptide ATP-binding protein; Belongs to the ABC transporter superfamily. (627 aa)
AEI04853.1Putative extracellular ligand-binding receptor. (402 aa)
secBProtein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. (161 aa)
AEI04903.1Cyclic nucleotide-binding domain protein. (146 aa)
ftsKDNA translocase FtsK. (818 aa)
ffhSignal recognition particle protein Ffh; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual comp [...] (515 aa)
ftsYCell division protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. (318 aa)
trbB1P-type conjugative transfer ATPase TrbB. (326 aa)
trbCPutative conjugal transfer protein TrbC. (110 aa)
trbE1Conjugal transfer protein TrbE. (817 aa)
trbJ1P-type conjugal transfer protein TrbJ. (255 aa)
trbL1Conjugal transfer protein TrbL. (454 aa)
trbF1Conjugal transfer protein TrbF. (229 aa)
trbG1Conjugal transfer protein TrbG. (327 aa)
trbI1Conjugal transfer protein TrbI. (394 aa)
kdpETranscriptional regulatory protein KdpE. (231 aa)
fur-2Transcriptional regulator, Fur family protein; Belongs to the Fur family. (162 aa)
secAPreprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (941 aa)
trbB2P-type conjugative transfer ATPase TrbB. (327 aa)
AEI05260.1Hypothetical protein. (110 aa)
AEI05261.1Hypothetical protein. (93 aa)
trbE2Conjugal transfer protein trbE. (818 aa)
trbJ2P-type conjugal transfer protein TrbJ. (251 aa)
trbL2Conjugal transfer protein TrbL. (448 aa)
trbF2Conjugal transfer protein TrbF. (229 aa)
trbG2Conjugal transfer protein TrbG. (318 aa)
trbI2Conjugal transfer protein TrbI. (386 aa)
mscSMechanosensitive ion channel MscS. (451 aa)
oxaAInner membrane protein OxaA; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. (610 aa)
gsiDGlutathione transport system permease GsiD. (298 aa)
gsiCGlutathione transport system permease GsiC. (317 aa)
AEI05339.1ABC transporter substrate-binding protein. (527 aa)
gsiA1Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. (682 aa)
AEI05346.1ABC transporter, substrate-binding protein. (504 aa)
dppBDipeptide transport system permease DppB. (309 aa)
dppC2Peptide transport system permease DppC. (299 aa)
dppDDipeptide transport ATP-binding protein DppD; Belongs to the ABC transporter superfamily. (330 aa)
dppFABC transporter, oligopeptide/dipeptide ATP-binding protein DppF; Belongs to the ABC transporter superfamily. (327 aa)
AEI05355.1GGDEF/EAL domain protein. (649 aa)
AEI05359.1Transcriptional regulator, IclR family. (269 aa)
AEI05360.1ABC transporter substrate-binding protein. (384 aa)
AEI05361.1ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (304 aa)
AEI05362.1Branched-chain amino acid transport permease; Belongs to the binding-protein-dependent transport system permease family. (380 aa)
livG1ABC transporter, branched-chain amino acid transport ATP-binding protein LivG. (257 aa)
livF1ABC transporter, branched-chain amino acid transport ATP-binding protein LivF. (238 aa)
AEI05382.1ABC transporter, substrate-binding protein. (397 aa)
livH1ABC transporter, putative branched-chain amino acid transport permease protein LivH; Belongs to the binding-protein-dependent transport system permease family. (291 aa)
livG2ABC transporter, branched-chain amino acid transport ATP-binding protein LivG; Belongs to the binding-protein-dependent transport system permease family. (599 aa)
livF2ABC transporter, putative branched-chain amino acid transport ATP-binding protein LivF. (246 aa)
cpaFFlp pilus assembly protein CpaF. (489 aa)
fadDlong-chain-fatty-acid--CoA ligase FadD. (560 aa)
AEI05611.1Hypothetical protein. (609 aa)
AEI05935.1ABC transporter substrate-binding protein, putative branched-chain amino acid transport system. (424 aa)
AEI05936.1ABC transporter permease protein, putative branched-chain amino acid transport system; Belongs to the binding-protein-dependent transport system permease family. (293 aa)
AEI05937.1ABC transporter permease protein, putative branched-chain amino acid transport; Belongs to the binding-protein-dependent transport system permease family. (337 aa)
AEI05938.1ABC transporter ATP-binding protein, putative branched-chain amino acid transport. (268 aa)
AEI05939.1ABC transporter ATP-binding protein, putative branched-chain amino acid transport. (239 aa)
AEI05988.1ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (284 aa)
AEI05989.1ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (336 aa)
AEI05990.1ABC transporter ATP-binding protein. (250 aa)
AEI05991.1ABC transporter ATP-binding protein. (235 aa)
AEI05992.1ABC transporter substrate-binding protein. (426 aa)
AEI05996.1Transcriptional regulator, IclR family. (255 aa)
AEI06009.1Transcriptional regulator, IclR family. (257 aa)
AEI06012.1Transcriptional regulator, IclR family. (274 aa)
lcfB3long-chain-fatty-acid--CoA ligase LcfB. (513 aa)
AEI06016.1ABC transporter substrate-binding protein. (363 aa)
AEI06040.1Transcriptional regulator, IclR family. (283 aa)
AEI06044.1Transcriptional regulator, IclR family. (258 aa)
AEI06103.1Hypothetical protein. (307 aa)
AEI06180.1Serine protease. (252 aa)
iclRAcetate operon repressor. (274 aa)
AEI06251.1Metal-dependent hydrolase. (315 aa)
AEI06252.1Phospho-2-dehydro-3-deoxyheptonate aldolase. (462 aa)
AEI06289.1Extracellular ligand-binding protein. (398 aa)
czcCOuter membrane efflux protein CzcC. (424 aa)
trbB3Conjugal transfer protein TrbB. (332 aa)
trbDPutative conjugal transfer protein TrbD. (87 aa)
trbE3Conjugal transfer protein TrbE. (834 aa)
AEI06336.1Putative conjugal transfer protein. (250 aa)
trbL3Conjugal transfer protein TrbL. (468 aa)
trbF3Conjugal transfer protein TrbF. (228 aa)
trbG3Conjugal transfer protein TrbG. (346 aa)
trbI3Conjugal transfer protein TrbI. (402 aa)
AEI06344.1Hypothetical protein. (847 aa)
livG3ABC transporter, high-affinity branched-chain amino acid transport ATP-binding protein LivG. (252 aa)
livF3ABC transporter, high-affinity branched-chain amino acid transport ATP-binding protein LivF. (238 aa)
AEI06367.1ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (287 aa)
AEI06368.1ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (322 aa)
AEI06447.1SecG family protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (122 aa)
AEI06486.1Peptidase M23. (442 aa)
yajCPreprotein translocase YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions. (113 aa)
AEI06538.1Extracellular solute-binding protein. (599 aa)
AEI06554.1Cyclic nucleotide-binding domain protein. (221 aa)
hfqRNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. (82 aa)
gsiA2Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. (539 aa)
AEI06660.1ABC transporter permease protein. (293 aa)
AEI06661.1ABC transporter permease protein. (305 aa)
AEI06662.1Bacterial extracellular solute-binding protein. (491 aa)
AEI06675.1Efflux transporter, outer membrane factor lipoprotein, NodT family. (512 aa)
AEI06694.1Secretion outer membrane protein, TolC family. (555 aa)
AEI06740.1Putative peptidase, M23/M37 family protein. (450 aa)
ribDRiboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (379 aa)
AEI06901.1Histone-like nucleoid-structuring protein H-NS. (125 aa)
AEI06902.1Histone-like nucleoid-structuring family. (118 aa)
AEI06907.1Extracellular ligand-binding receptor protein. (390 aa)
secYPreprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (443 aa)
AEI07058.1Transcriptional regulator, IclR family. (258 aa)
livH2ABC transporter, high-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family. (304 aa)
livMABC transporter, high-affinity branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family. (442 aa)
livG4ABC transporter, high-affinity branched-chain amino acid transport ATP-binding protein LivG. (278 aa)
livF4ABC transporter, high-affinity branched-chain amino acid transport ATP-binding protein LivF. (244 aa)
livJLeu/Ile/Val-binding protein LivJ. (369 aa)
AEI07347.1Hypothetical protein. (148 aa)
AEI07353.1Putative Leu/Ile/Val-binding protein. (393 aa)
lcfB4long-chain-fatty-acid--CoA ligase LcfB. (523 aa)
AEI07365.1Hypothetical protein. (337 aa)
AEI07655.1Transcriptional regulator, IclR family. (249 aa)
AEI07664.1Hypothetical protein. (284 aa)
AEI07670.1Hypothetical protein. (189 aa)
AEI07729.1WD-40 repeat protein. (336 aa)
Your Current Organism:
Oligotropha carboxidovorans
NCBI taxonomy Id: 504832
Other names: O. carboxidovorans OM5, Oligotropha carboxidovorans OM5, Oligotropha carboxidovorans str. OM5, Oligotropha carboxidovorans strain OM5
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