(13 nodes) Mixed, incl. Iron storage, and NMT1/THI5 family network (Halomonas chromatireducens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	bfr_1	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (155 aa)
	cmpC	Bicarbonate transport ATP-binding protein CmpC. (345 aa)
	pdtaR	Putative transcriptional regulatory protein pdtaR. (199 aa)
	nhaP2	K(+)/H(+) antiporter NhaP2. (568 aa)
	AMD01179.1	Putative thiamine biosynthesis protein. (420 aa)
	lptF	Lipopolysaccharide export system permease protein LptF. (359 aa)
	lptG	Lipopolysaccharide export system permease protein LptG. (354 aa)
	AMD01956.1	RDD family protein. (158 aa)
	bfd	Bacterioferritin-associated ferredoxin. (68 aa)
	bfr_2	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (160 aa)
	AMD01959.1	Putative thiamine biosynthesis protein. (349 aa)
	tauB	Taurine import ATP-binding protein TauB. (269 aa)
	ssuC	Putative aliphatic sulfonates transport permease protein SsuC. (255 aa)

Your Current Organism:

Halomonas chromatireducens

NCBI taxonomy Id: 507626
Other names: H. chromatireducens, Halomonas sp. AGD 8-3, strain AGD 8-3 c

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMD01179.1	nhaP2	LOKO_02115	LOKO_02114	Putative thiamine biosynthesis protein.	K(+)/H(+) antiporter NhaP2.	0.751
AMD01179.1	ssuC	LOKO_02115	LOKO_02913	Putative thiamine biosynthesis protein.	Putative aliphatic sulfonates transport permease protein SsuC.	0.664
AMD01179.1	tauB	LOKO_02115	LOKO_02912	Putative thiamine biosynthesis protein.	Taurine import ATP-binding protein TauB.	0.690
AMD01956.1	bfd	LOKO_02908	LOKO_02909	RDD family protein.	Bacterioferritin-associated ferredoxin.	0.744
AMD01956.1	bfr_2	LOKO_02908	LOKO_02910	RDD family protein.	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	0.553
AMD01956.1	lptF	LOKO_02908	LOKO_02906	RDD family protein.	Lipopolysaccharide export system permease protein LptF.	0.870
AMD01956.1	lptG	LOKO_02908	LOKO_02907	RDD family protein.	Lipopolysaccharide export system permease protein LptG.	0.870
AMD01959.1	bfr_2	LOKO_02911	LOKO_02910	Putative thiamine biosynthesis protein.	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	0.422
AMD01959.1	ssuC	LOKO_02911	LOKO_02913	Putative thiamine biosynthesis protein.	Putative aliphatic sulfonates transport permease protein SsuC.	0.977
AMD01959.1	tauB	LOKO_02911	LOKO_02912	Putative thiamine biosynthesis protein.	Taurine import ATP-binding protein TauB.	0.987
bfd	AMD01956.1	LOKO_02909	LOKO_02908	Bacterioferritin-associated ferredoxin.	RDD family protein.	0.744
bfd	bfr_1	LOKO_02909	LOKO_00330	Bacterioferritin-associated ferredoxin.	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	0.810
bfd	bfr_2	LOKO_02909	LOKO_02910	Bacterioferritin-associated ferredoxin.	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	0.943
bfd	lptF	LOKO_02909	LOKO_02906	Bacterioferritin-associated ferredoxin.	Lipopolysaccharide export system permease protein LptF.	0.779
bfd	lptG	LOKO_02909	LOKO_02907	Bacterioferritin-associated ferredoxin.	Lipopolysaccharide export system permease protein LptG.	0.742
bfr_1	bfd	LOKO_00330	LOKO_02909	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	Bacterioferritin-associated ferredoxin.	0.810
bfr_1	bfr_2	LOKO_00330	LOKO_02910	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	0.924
bfr_2	AMD01956.1	LOKO_02910	LOKO_02908	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	RDD family protein.	0.553
bfr_2	AMD01959.1	LOKO_02910	LOKO_02911	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	Putative thiamine biosynthesis protein.	0.422
bfr_2	bfd	LOKO_02910	LOKO_02909	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.	Bacterioferritin-associated ferredoxin.	0.943