STRINGSTRING
PGRI_018540 PGRI_018540 PGRI_069590 PGRI_069590 PGRI_067220 PGRI_067220 PGRI_087400 PGRI_087400 PGRI_080800 PGRI_080800 PGRI_008330 PGRI_008330 PGRI_075180 PGRI_075180
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PGRI_018540Aspartate aminotransferase. (429 aa)
PGRI_069590Citrate synthase; Belongs to the citrate synthase family. (465 aa)
PGRI_067220Malate dehydrogenase, type 1; Belongs to the LDH/MDH superfamily. (330 aa)
PGRI_087400Malate dehydrogenase. (340 aa)
PGRI_080800ATP-grasp fold, succinyl-CoA synthetase-type. (485 aa)
PGRI_008330Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1192 aa)
PGRI_075180Aspartate aminotransferase. (416 aa)
Your Current Organism:
Penicillium griseofulvum
NCBI taxonomy Id: 5078
Other names: CBS 185.27, P. griseofulvum, Penicillium patulum
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