Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| FEN1 | PGRI_014930 | A0A135L9V7 | A0A135LF87 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | RNase H domain-containing protein. | 0.459 |
| FEN1 | PGRI_033580 | A0A135L9V7 | A0A135L9E5 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | RNase H domain-containing protein. | 0.459 |
| FEN1 | PGRI_053730 | A0A135L9V7 | A0A135LC25 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | DNA repair protein (XPGC). | 0.648 |
| FEN1 | PGRI_067090 | A0A135L9V7 | A0A135LQ93 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Uncharacterized protein. | 0.420 |
| FEN1 | PGRI_076700 | A0A135L9V7 | A0A135LZY4 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | DeoxyUTP pyrophosphatase. | 0.420 |
| FEN1 | PGRI_079190 | A0A135L9V7 | A0A135LUL1 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | RNase H domain-containing protein. | 0.459 |
| PGRI_000980 | PGRI_001670 | A0A135LVP4 | A0A135LVX8 | Uncharacterized protein. | Pyruvate/Phosphoenolpyruvate kinase. | 0.552 |
| PGRI_000980 | PGRI_011470 | A0A135LVP4 | A0A135LE82 | Uncharacterized protein. | Nitrogen regulatory PII-like, alpha/beta. | 0.414 |
| PGRI_000980 | PGRI_023750 | A0A135LVP4 | A0A135LHS3 | Uncharacterized protein. | IMP-specific 5'-nucleotidase 1; IMP-specific 5'-nucleotidase involved in IMP (inositol monophosphate) degradation. | 0.633 |
| PGRI_000980 | PGRI_036860 | A0A135LVP4 | A0A135LDI2 | Uncharacterized protein. | Alpha-D-phosphohexomutase superfamily; Belongs to the phosphohexose mutase family. | 0.467 |
| PGRI_000980 | PGRI_040650 | A0A135LVP4 | A0A135L868 | Uncharacterized protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.453 |
| PGRI_000980 | PGRI_042490 | A0A135LVP4 | A0A135L8Q1 | Uncharacterized protein. | Enolase. | 0.572 |
| PGRI_000980 | PGRI_046560 | A0A135LVP4 | A0A135LA88 | Uncharacterized protein. | Inorganic pyrophosphatase. | 0.482 |
| PGRI_000980 | PGRI_048330 | A0A135LVP4 | A0A135LAH9 | Uncharacterized protein. | Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Belongs to the phosphohexose mutase family. | 0.606 |
| PGRI_000980 | PGRI_049050 | A0A135LVP4 | A0A135LAS6 | Uncharacterized protein. | Uncharacterized protein. | 0.482 |
| PGRI_000980 | PGRI_053990 | A0A135LVP4 | A0A135LC53 | Uncharacterized protein. | Ribose-phosphate diphosphokinase. | 0.487 |
| PGRI_000980 | PGRI_064860 | A0A135LVP4 | A0A135LPL2 | Uncharacterized protein. | Ribose-phosphate diphosphokinase. | 0.487 |
| PGRI_000980 | PGRI_087460 | A0A135LVP4 | A0A135LU25 | Uncharacterized protein. | Ribose-phosphate diphosphokinase. | 0.487 |
| PGRI_001670 | PGRI_000980 | A0A135LVX8 | A0A135LVP4 | Pyruvate/Phosphoenolpyruvate kinase. | Uncharacterized protein. | 0.552 |
| PGRI_001670 | PGRI_052330 | A0A135LVX8 | A0A135LBN1 | Pyruvate/Phosphoenolpyruvate kinase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. | 0.552 |
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