STRINGSTRING
PGRI_066430 PGRI_066430 PGRI_003230 PGRI_003230 PGRI_080730 PGRI_080730 PGRI_018750 PGRI_018750
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PGRI_066430Major facilitator superfamily domain, general substrate transporter. (781 aa)
PGRI_003230Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily. (520 aa)
PGRI_080730Tryptophan synthase. (403 aa)
PGRI_018750Tryptophan synthase. (723 aa)
Your Current Organism:
Penicillium griseofulvum
NCBI taxonomy Id: 5078
Other names: CBS 185.27, P. griseofulvum, Penicillium patulum
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