13 items (Penicillium griseofulvum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PGRI_041540	SNF2-related protein. (1907 aa)
	PGRI_017420	B-block binding subunit of TFIIIC. (1858 aa)
	PGRI_061310	Uncharacterized protein. (494 aa)
	PGRI_061910	Uncharacterized protein. (618 aa)
	PGRI_044770	Histone H3; Belongs to the histone H3 family. (136 aa)
	PGRI_065420	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1249 aa)
	PGRI_066840	DNA polymerase V. (982 aa)
	PGRI_068110	Histone-fold. (171 aa)
	PGRI_090490	Uncharacterized protein. (897 aa)
	PGRI_085890	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (370 aa)
	PGRI_005690	Tetratricopeptide-like helical. (1096 aa)
	PGRI_072920	Transcription initiation factor Rrn11. (434 aa)
	PGRI_073760	SWIB domain-containing protein. (276 aa)

Your Current Organism:

Penicillium griseofulvum

NCBI taxonomy Id: 5078
Other names: CBS 185.27, P. griseofulvum, Penicillium patulum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PGRI_005690	PGRI_017420	A0A135LX30	A0A135LFV9	Tetratricopeptide-like helical.	B-block binding subunit of TFIIIC.	0.969
PGRI_005690	PGRI_065420	A0A135LX30	A0A135LPT4	Tetratricopeptide-like helical.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.690
PGRI_017420	PGRI_005690	A0A135LFV9	A0A135LX30	B-block binding subunit of TFIIIC.	Tetratricopeptide-like helical.	0.969
PGRI_044770	PGRI_061310	A0A135LP21	A0A135LMI8	Histone H3; Belongs to the histone H3 family.	Uncharacterized protein.	0.594
PGRI_044770	PGRI_065420	A0A135LP21	A0A135LPT4	Histone H3; Belongs to the histone H3 family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.769
PGRI_044770	PGRI_066840	A0A135LP21	A0A135LQ89	Histone H3; Belongs to the histone H3 family.	DNA polymerase V.	0.677
PGRI_044770	PGRI_073760	A0A135LP21	A0A135LZ40	Histone H3; Belongs to the histone H3 family.	SWIB domain-containing protein.	0.725
PGRI_061310	PGRI_044770	A0A135LMI8	A0A135LP21	Uncharacterized protein.	Histone H3; Belongs to the histone H3 family.	0.594
PGRI_061310	PGRI_065420	A0A135LMI8	A0A135LPT4	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
PGRI_061310	PGRI_066840	A0A135LMI8	A0A135LQ89	Uncharacterized protein.	DNA polymerase V.	0.820
PGRI_061310	PGRI_068110	A0A135LMI8	A0A135LQQ5	Uncharacterized protein.	Histone-fold.	0.594
PGRI_061310	PGRI_072920	A0A135LMI8	A0A135LYV3	Uncharacterized protein.	Transcription initiation factor Rrn11.	0.885
PGRI_061310	PGRI_090490	A0A135LMI8	A0A135LRR0	Uncharacterized protein.	Uncharacterized protein.	0.607
PGRI_061910	PGRI_072920	A0A135LMP6	A0A135LYV3	Uncharacterized protein.	Transcription initiation factor Rrn11.	0.555
PGRI_065420	PGRI_005690	A0A135LPT4	A0A135LX30	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Tetratricopeptide-like helical.	0.690
PGRI_065420	PGRI_044770	A0A135LPT4	A0A135LP21	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Histone H3; Belongs to the histone H3 family.	0.769
PGRI_065420	PGRI_061310	A0A135LPT4	A0A135LMI8	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.999
PGRI_065420	PGRI_066840	A0A135LPT4	A0A135LQ89	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA polymerase V.	0.956
PGRI_065420	PGRI_068110	A0A135LPT4	A0A135LQQ5	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Histone-fold.	0.769
PGRI_065420	PGRI_072920	A0A135LPT4	A0A135LYV3	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription initiation factor Rrn11.	0.877