STRINGSTRING
PGRI_041730 PGRI_041730 PGRI_042970 PGRI_042970 PGRI_045800 PGRI_045800 PGRI_048950 PGRI_048950 PGRI_021900 PGRI_021900 PGRI_029200 PGRI_029200 PGRI_063040 PGRI_063040 PGRI_080800 PGRI_080800
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PGRI_041730Uncharacterized protein. (197 aa)
PGRI_042970Isocitrate dehydrogenase [NAD] subunit, mitochondrial. (384 aa)
PGRI_045800Uncharacterized protein. (312 aa)
PGRI_048950Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (400 aa)
PGRI_021900Argininosuccinate synthetase, catalytic/multimerization domain body. (416 aa)
PGRI_029200Isocitrate dehydrogenase [NAD] subunit, mitochondrial. (383 aa)
PGRI_063040Citrate synthase; Belongs to the citrate synthase family. (471 aa)
PGRI_080800ATP-grasp fold, succinyl-CoA synthetase-type. (485 aa)
Your Current Organism:
Penicillium griseofulvum
NCBI taxonomy Id: 5078
Other names: CBS 185.27, P. griseofulvum, Penicillium patulum
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