STRINGSTRING
Cseg_3523 Cseg_3523 Cseg_0962 Cseg_0962 Cseg_1092 Cseg_1092 Cseg_1145 Cseg_1145 Cseg_1203 Cseg_1203 Cseg_2970 Cseg_2970
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cseg_3523PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ccs:CCNA_03127 aminoacyl-histidine dipeptidase. (432 aa)
Cseg_0962PFAM: peptidase M28; KEGG: ccs:CCNA_02933 aminopeptidase. (574 aa)
Cseg_1092TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: ccs:CCNA_02686 N-carbamoyl-L-amino acid hydrolase; PFAM: peptidase M20. (423 aa)
Cseg_1145PFAM: peptidase M28; KEGG: cak:Caul_3661 peptidase M28. (465 aa)
Cseg_1203PFAM: peptidase M28; KEGG: ccs:CCNA_02588 aminopeptidase. (311 aa)
Cseg_2970PFAM: peptidase M28; KEGG: swi:Swit_0237 peptidase M28. (453 aa)
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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