(7 nodes) 2Fe-2S ferredoxin-type iron-sulfur binding domain network (Pedobacter sp. V48)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ETZ24733.1	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (157 aa)
	ETZ20093.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (168 aa)
	ETZ19689.1	Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (256 aa)
	ETZ19536.1	Ferredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (109 aa)
	ETZ24408.1	NADH dehydrogenase subunit G; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (334 aa)
	ETZ23291.1	Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (248 aa)
	ETZ23319.1	Ferredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (110 aa)

Your Current Organism:

Pedobacter sp. V48

NCBI taxonomy Id: 509635
Other names: P. sp. V48

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ETZ19536.1	ETZ24408.1	N824_12400	N824_12890	Ferredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	NADH dehydrogenase subunit G; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.781
ETZ19689.1	ETZ23291.1	N824_09465	N824_17670	Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.869
ETZ19689.1	ETZ24408.1	N824_09465	N824_12890	Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	NADH dehydrogenase subunit G; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.804
ETZ23291.1	ETZ19689.1	N824_17670	N824_09465	Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.869
ETZ23291.1	ETZ24408.1	N824_17670	N824_12890	Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	NADH dehydrogenase subunit G; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.804
ETZ23319.1	ETZ24408.1	N824_17815	N824_12890	Ferredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	NADH dehydrogenase subunit G; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.781
ETZ24408.1	ETZ19536.1	N824_12890	N824_12400	NADH dehydrogenase subunit G; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Ferredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.781
ETZ24408.1	ETZ19689.1	N824_12890	N824_09465	NADH dehydrogenase subunit G; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.804
ETZ24408.1	ETZ23291.1	N824_12890	N824_17670	NADH dehydrogenase subunit G; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.804
ETZ24408.1	ETZ23319.1	N824_12890	N824_17815	NADH dehydrogenase subunit G; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Ferredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.781