(14 nodes) Lipoprotein particle binding, and Retinoid metabolism and transport network (Necator americanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NECAME_15141	Low-density lipoprotein receptor domain class A. (172 aa)
	NECAME_15137	EGF-like domain protein. (369 aa)
	NECAME_15140	Laminin B. (298 aa)
	NECAME_15138	Immunoglobulin domain protein. (795 aa)
	NECAME_15139	Laminin B. (556 aa)
	NECAME_18648	Uncharacterized protein. (183 aa)
	NECAME_11517	Low-density lipoprotein receptor repeat class B. (312 aa)
	NECAME_11515	Uncharacterized protein. (184 aa)
	NECAME_11520	Uncharacterized protein. (329 aa)
	NECAME_11516	Uncharacterized protein. (156 aa)
	NECAME_11513	EGF-like domain-containing protein. (301 aa)
	NECAME_11518	Low-density lipoprotein receptor repeat class B. (119 aa)
	NECAME_11514	Low-density lipoprotein receptor domain class A. (330 aa)
	NECAME_16533	EGF-like domain-containing protein. (108 aa)

Your Current Organism:

Necator americanus

NCBI taxonomy Id: 51031
Other names: N. americanus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NECAME_11513	NECAME_11514	W2T657	W2T6N2	EGF-like domain-containing protein.	Low-density lipoprotein receptor domain class A.	0.837
NECAME_11513	NECAME_11515	W2T657	W2T425	EGF-like domain-containing protein.	Uncharacterized protein.	0.595
NECAME_11513	NECAME_11517	W2T657	W2T3S5	EGF-like domain-containing protein.	Low-density lipoprotein receptor repeat class B.	0.747
NECAME_11513	NECAME_11518	W2T657	W2T664	EGF-like domain-containing protein.	Low-density lipoprotein receptor repeat class B.	0.798
NECAME_11513	NECAME_11520	W2T657	W2T431	EGF-like domain-containing protein.	Uncharacterized protein.	0.534
NECAME_11513	NECAME_18648	W2T657	W2STP0	EGF-like domain-containing protein.	Uncharacterized protein.	0.616
NECAME_11514	NECAME_11513	W2T6N2	W2T657	Low-density lipoprotein receptor domain class A.	EGF-like domain-containing protein.	0.837
NECAME_11514	NECAME_11515	W2T6N2	W2T425	Low-density lipoprotein receptor domain class A.	Uncharacterized protein.	0.468
NECAME_11514	NECAME_11517	W2T6N2	W2T3S5	Low-density lipoprotein receptor domain class A.	Low-density lipoprotein receptor repeat class B.	0.756
NECAME_11514	NECAME_11518	W2T6N2	W2T664	Low-density lipoprotein receptor domain class A.	Low-density lipoprotein receptor repeat class B.	0.665
NECAME_11514	NECAME_18648	W2T6N2	W2STP0	Low-density lipoprotein receptor domain class A.	Uncharacterized protein.	0.477
NECAME_11515	NECAME_11513	W2T425	W2T657	Uncharacterized protein.	EGF-like domain-containing protein.	0.595
NECAME_11515	NECAME_11514	W2T425	W2T6N2	Uncharacterized protein.	Low-density lipoprotein receptor domain class A.	0.468
NECAME_11515	NECAME_11517	W2T425	W2T3S5	Uncharacterized protein.	Low-density lipoprotein receptor repeat class B.	0.650
NECAME_11515	NECAME_11518	W2T425	W2T664	Uncharacterized protein.	Low-density lipoprotein receptor repeat class B.	0.716
NECAME_11517	NECAME_11513	W2T3S5	W2T657	Low-density lipoprotein receptor repeat class B.	EGF-like domain-containing protein.	0.747
NECAME_11517	NECAME_11514	W2T3S5	W2T6N2	Low-density lipoprotein receptor repeat class B.	Low-density lipoprotein receptor domain class A.	0.756
NECAME_11517	NECAME_11515	W2T3S5	W2T425	Low-density lipoprotein receptor repeat class B.	Uncharacterized protein.	0.650
NECAME_11517	NECAME_11518	W2T3S5	W2T664	Low-density lipoprotein receptor repeat class B.	Low-density lipoprotein receptor repeat class B.	0.926
NECAME_11517	NECAME_18648	W2T3S5	W2STP0	Low-density lipoprotein receptor repeat class B.	Uncharacterized protein.	0.650