(11 nodes) Autophagy of peroxisome network (Necator americanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NECAME_15928	HEAT repeat protein. (283 aa)
	NECAME_15927	WD domain, G-beta repeat protein. (502 aa)
	NECAME_15926	Uncharacterized protein. (78 aa)
	NECAME_15093	Phosphatidylinositol 3-kinase catalytic subunit type 3. (757 aa)
	NECAME_05015	ATG11 domain-containing protein. (109 aa)
	NECAME_05014	Uncharacterized protein. (930 aa)
	NECAME_18884	Uncharacterized protein. (71 aa)
	NECAME_06868	ATG protein. (123 aa)
	NECAME_06871	Chorein_N domain-containing protein. (723 aa)
	NECAME_06869	Uncharacterized protein. (714 aa)
	NECAME_06870	Uncharacterized protein. (486 aa)

Your Current Organism:

Necator americanus

NCBI taxonomy Id: 51031
Other names: N. americanus

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NECAME_05014	NECAME_15093	W2SKW0	W2SJH0	Uncharacterized protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.791
NECAME_05014	NECAME_15926	W2SKW0	W2SHR3	Uncharacterized protein.	Uncharacterized protein.	0.523
NECAME_05014	NECAME_15927	W2SKW0	W2SFH3	Uncharacterized protein.	WD domain, G-beta repeat protein.	0.523
NECAME_05014	NECAME_15928	W2SKW0	W2SF89	Uncharacterized protein.	HEAT repeat protein.	0.523
NECAME_05014	NECAME_18884	W2SKW0	W2SRZ2	Uncharacterized protein.	Uncharacterized protein.	0.523
NECAME_05015	NECAME_15093	W2SKJ4	W2SJH0	ATG11 domain-containing protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.791
NECAME_05015	NECAME_15926	W2SKJ4	W2SHR3	ATG11 domain-containing protein.	Uncharacterized protein.	0.523
NECAME_05015	NECAME_15927	W2SKJ4	W2SFH3	ATG11 domain-containing protein.	WD domain, G-beta repeat protein.	0.523
NECAME_05015	NECAME_15928	W2SKJ4	W2SF89	ATG11 domain-containing protein.	HEAT repeat protein.	0.523
NECAME_05015	NECAME_18884	W2SKJ4	W2SRZ2	ATG11 domain-containing protein.	Uncharacterized protein.	0.523
NECAME_06868	NECAME_06871	W2TQY5	W2TRN3	ATG protein.	Chorein_N domain-containing protein.	0.400
NECAME_06869	NECAME_06870	W2TTN7	W2TTT7	Uncharacterized protein.	Uncharacterized protein.	0.716
NECAME_06869	NECAME_06871	W2TTN7	W2TRN3	Uncharacterized protein.	Chorein_N domain-containing protein.	0.792
NECAME_06870	NECAME_06869	W2TTT7	W2TTN7	Uncharacterized protein.	Uncharacterized protein.	0.716
NECAME_06870	NECAME_06871	W2TTT7	W2TRN3	Uncharacterized protein.	Chorein_N domain-containing protein.	0.887
NECAME_06871	NECAME_06868	W2TRN3	W2TQY5	Chorein_N domain-containing protein.	ATG protein.	0.400
NECAME_06871	NECAME_06869	W2TRN3	W2TTN7	Chorein_N domain-containing protein.	Uncharacterized protein.	0.792
NECAME_06871	NECAME_06870	W2TRN3	W2TTT7	Chorein_N domain-containing protein.	Uncharacterized protein.	0.887
NECAME_15093	NECAME_05014	W2SJH0	W2SKW0	Phosphatidylinositol 3-kinase catalytic subunit type 3.	Uncharacterized protein.	0.791
NECAME_15093	NECAME_05015	W2SJH0	W2SKJ4	Phosphatidylinositol 3-kinase catalytic subunit type 3.	ATG11 domain-containing protein.	0.791