(23 nodes) Protein stabilization network (Necator americanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NECAME_09633	Uncharacterized protein. (521 aa)
	NECAME_16465	Uncharacterized protein. (545 aa)
	NECAME_16815	Cdc37 Hsp90 binding domain protein. (420 aa)
	NECAME_17596	Uncharacterized protein. (64 aa)
	NECAME_17701	Protein kinase domain-containing protein. (145 aa)
	NECAME_17704	Zinc finger, C2H2 type. (346 aa)
	NECAME_08594	Uncharacterized protein. (109 aa)
	NECAME_08592	Uncharacterized protein. (82 aa)
	NECAME_08591	Uncharacterized protein. (252 aa)
	NECAME_08593	Uncharacterized protein. (115 aa)
	NECAME_09632	Uncharacterized protein. (402 aa)
	NECAME_09735	Uncharacterized protein. (232 aa)
	NECAME_00318	ATPase_AAA_core domain-containing protein. (340 aa)
	NECAME_15092	Uncharacterized protein. (104 aa)
	NECAME_15152	Uncharacterized protein. (159 aa)
	NECAME_04687	Uncharacterized protein. (122 aa)
	NECAME_04686	Uncharacterized protein. (491 aa)
	NECAME_19300	Hsp20/alpha crystallin family protein; Belongs to the small heat shock protein (HSP20) family. (146 aa)
	NECAME_04685	Uncharacterized protein. (178 aa)
	NECAME_19028	Hsp20/alpha crystallin family protein; Belongs to the small heat shock protein (HSP20) family. (149 aa)
	NECAME_19378	Hsp20/alpha crystallin family protein; Belongs to the small heat shock protein (HSP20) family. (146 aa)
	NECAME_00316	Uncharacterized protein. (147 aa)
	NECAME_16504	BAG domain-containing protein. (79 aa)

Your Current Organism:

Necator americanus

NCBI taxonomy Id: 51031
Other names: N. americanus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NECAME_04685	NECAME_16815	W2SQZ5	W2TU64	Uncharacterized protein.	Cdc37 Hsp90 binding domain protein.	0.878
NECAME_04686	NECAME_04687	W2SNK4	W2SN56	Uncharacterized protein.	Uncharacterized protein.	0.499
NECAME_04686	NECAME_16815	W2SNK4	W2TU64	Uncharacterized protein.	Cdc37 Hsp90 binding domain protein.	0.878
NECAME_04687	NECAME_04686	W2SN56	W2SNK4	Uncharacterized protein.	Uncharacterized protein.	0.499
NECAME_04687	NECAME_16815	W2SN56	W2TU64	Uncharacterized protein.	Cdc37 Hsp90 binding domain protein.	0.878
NECAME_08593	NECAME_08594	W2TGW8	W2TJF9	Uncharacterized protein.	Uncharacterized protein.	0.642
NECAME_08594	NECAME_08593	W2TJF9	W2TGW8	Uncharacterized protein.	Uncharacterized protein.	0.642
NECAME_09735	NECAME_16504	W2TDB9	W2TYC8	Uncharacterized protein.	BAG domain-containing protein.	0.773
NECAME_16504	NECAME_09735	W2TYC8	W2TDB9	BAG domain-containing protein.	Uncharacterized protein.	0.773
NECAME_16815	NECAME_04685	W2TU64	W2SQZ5	Cdc37 Hsp90 binding domain protein.	Uncharacterized protein.	0.878
NECAME_16815	NECAME_04686	W2TU64	W2SNK4	Cdc37 Hsp90 binding domain protein.	Uncharacterized protein.	0.878
NECAME_16815	NECAME_04687	W2TU64	W2SN56	Cdc37 Hsp90 binding domain protein.	Uncharacterized protein.	0.878