8 items (Aspergillus oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AO090010000482	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (517 aa)
	AO090701000168	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...] (173 aa)
	AO090026000372	Uncharacterized protein. (226 aa)
	AO090023000599	ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family. (156 aa)
	AO090005001077	Uncharacterized protein. (199 aa)
	AO090005000749	ATP synthase subunit gamma. (290 aa)
	AO090005000617	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (556 aa)
	AO090005000604	Uncharacterized protein. (236 aa)

Your Current Organism:

Aspergillus oryzae

NCBI taxonomy Id: 510516
Other names: A. oryzae RIB40, Aspergillus oryzae RIB40

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AO090005000604	AO090005000617	Q2US19	Q2US06	Uncharacterized protein.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
AO090005000604	AO090005000749	Q2US19	Q2URN9	Uncharacterized protein.	ATP synthase subunit gamma.	0.999
AO090005000604	AO090005001077	Q2US19	Q2UQW2	Uncharacterized protein.	Uncharacterized protein.	0.998
AO090005000604	AO090010000482	Q2US19	Q2TWP0	Uncharacterized protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
AO090005000604	AO090023000599	Q2US19	Q2UH38	Uncharacterized protein.	ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family.	0.998
AO090005000604	AO090026000372	Q2US19	Q2UF30	Uncharacterized protein.	Uncharacterized protein.	0.999
AO090005000604	AO090701000168	Q2US19	Q2U954	Uncharacterized protein.	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	0.999
AO090005000617	AO090005000604	Q2US06	Q2US19	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.999
AO090005000617	AO090005000749	Q2US06	Q2URN9	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit gamma.	0.999
AO090005000617	AO090005001077	Q2US06	Q2UQW2	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.998
AO090005000617	AO090010000482	Q2US06	Q2TWP0	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
AO090005000617	AO090023000599	Q2US06	Q2UH38	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family.	0.999
AO090005000617	AO090026000372	Q2US06	Q2UF30	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.999
AO090005000617	AO090701000168	Q2US06	Q2U954	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	0.999
AO090005000749	AO090005000604	Q2URN9	Q2US19	ATP synthase subunit gamma.	Uncharacterized protein.	0.999
AO090005000749	AO090005000617	Q2URN9	Q2US06	ATP synthase subunit gamma.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
AO090005000749	AO090005001077	Q2URN9	Q2UQW2	ATP synthase subunit gamma.	Uncharacterized protein.	0.993
AO090005000749	AO090010000482	Q2URN9	Q2TWP0	ATP synthase subunit gamma.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
AO090005000749	AO090023000599	Q2URN9	Q2UH38	ATP synthase subunit gamma.	ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family.	0.999
AO090005000749	AO090026000372	Q2URN9	Q2UF30	ATP synthase subunit gamma.	Uncharacterized protein.	0.999