6 items (Aspergillus oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AO090010000155	Uncharacterized protein. (496 aa)
	AO090701000175	Uncharacterized protein. (559 aa)
	AO090026000253	Uncharacterized protein. (483 aa)
	AO090023000740	Uncharacterized protein. (563 aa)
	AO090001000359	Uncharacterized protein. (551 aa)
	AO090009000222	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (448 aa)

Your Current Organism:

Aspergillus oryzae

NCBI taxonomy Id: 510516
Other names: A. oryzae RIB40, Aspergillus oryzae RIB40

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AO090001000359	AO090009000222	Q2UNH9	Q2UUQ4	Uncharacterized protein.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.918
AO090001000359	AO090023000740	Q2UNH9	Q2UGR8	Uncharacterized protein.	Uncharacterized protein.	0.903
AO090009000222	AO090001000359	Q2UUQ4	Q2UNH9	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Uncharacterized protein.	0.918
AO090009000222	AO090010000155	Q2UUQ4	Q2TXG4	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Uncharacterized protein.	0.684
AO090009000222	AO090023000740	Q2UUQ4	Q2UGR8	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Uncharacterized protein.	0.918
AO090009000222	AO090026000253	Q2UUQ4	Q2UFD1	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Uncharacterized protein.	0.684
AO090009000222	AO090701000175	Q2UUQ4	Q2U948	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Uncharacterized protein.	0.684
AO090010000155	AO090009000222	Q2TXG4	Q2UUQ4	Uncharacterized protein.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.684
AO090010000155	AO090026000253	Q2TXG4	Q2UFD1	Uncharacterized protein.	Uncharacterized protein.	0.903
AO090010000155	AO090701000175	Q2TXG4	Q2U948	Uncharacterized protein.	Uncharacterized protein.	0.904
AO090023000740	AO090001000359	Q2UGR8	Q2UNH9	Uncharacterized protein.	Uncharacterized protein.	0.903
AO090023000740	AO090009000222	Q2UGR8	Q2UUQ4	Uncharacterized protein.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.918
AO090026000253	AO090009000222	Q2UFD1	Q2UUQ4	Uncharacterized protein.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.684
AO090026000253	AO090010000155	Q2UFD1	Q2TXG4	Uncharacterized protein.	Uncharacterized protein.	0.903
AO090026000253	AO090701000175	Q2UFD1	Q2U948	Uncharacterized protein.	Uncharacterized protein.	0.904
AO090701000175	AO090009000222	Q2U948	Q2UUQ4	Uncharacterized protein.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.684
AO090701000175	AO090010000155	Q2U948	Q2TXG4	Uncharacterized protein.	Uncharacterized protein.	0.904
AO090701000175	AO090026000253	Q2U948	Q2UFD1	Uncharacterized protein.	Uncharacterized protein.	0.904