30 items (Aspergillus oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AO090010000607	Uncharacterized protein. (580 aa)
	AO090011000755	Uncharacterized protein; Belongs to the multicopper oxidase family. (657 aa)
	AO090011000067	CutC domain-containing protein. (190 aa)
	AO090038000258	Sod_Cu domain-containing protein. (128 aa)
	AO090038000187	HMA domain-containing protein. (1138 aa)
	AO090020000227	Uncharacterized protein. (254 aa)
	AO090020000180	Thioredoxin domain-containing protein. (322 aa)
	AO090113000108	Uncharacterized protein. (225 aa)
	AO090113000107	Zn(2)-C6 fungal-type domain-containing protein. (342 aa)
	AO090124000036	Uncharacterized protein; Belongs to the multicopper oxidase family. (621 aa)
	AO090166000081	Uncharacterized protein; Belongs to the multicopper oxidase family. (598 aa)
	AO090102000589	Uncharacterized protein; Belongs to the multicopper oxidase family. (602 aa)
	AO090102000546	Uncharacterized protein; Belongs to the multicopper oxidase family. (592 aa)
	AO090012000848	Uncharacterized protein. (1271 aa)
	AO090012000170	Plastocyanin-like domain-containing protein. (559 aa)
	AO090026000720	PGA_cap domain-containing protein. (384 aa)
	AO090026000421	Uncharacterized protein. (224 aa)
	AO090026000179	Uncharacterized protein. (184 aa)
	AO090023000378	Ldi domain-containing protein. (278 aa)
	AO090023000377	Ldi domain-containing protein. (221 aa)
	AO090003001143	Amino_oxidase domain-containing protein. (389 aa)
	AO090003000251	Ldi domain-containing protein. (559 aa)
	AO090003000161	Uncharacterized protein. (224 aa)
	AO090005001272	Uncharacterized protein. (115 aa)
	AO090005001177	Uncharacterized protein; Belongs to the multicopper oxidase family. (587 aa)
	AO090005001096	Plastocyanin-like domain-containing protein. (312 aa)
	AO090005000448	Uncharacterized protein. (789 aa)
	AO090009000330	Uncharacterized protein. (1180 aa)
	AO090009000109	Uncharacterized protein. (1189 aa)
	AO090009000067	Uncharacterized protein. (587 aa)

Your Current Organism:

Aspergillus oryzae

NCBI taxonomy Id: 510516
Other names: A. oryzae RIB40, Aspergillus oryzae RIB40

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AO090003000251	AO090003001143	Q2ULV6	Q2UJN1	Ldi domain-containing protein.	Amino_oxidase domain-containing protein.	0.538
AO090003000251	AO090005001272	Q2ULV6	Q2UQF5	Ldi domain-containing protein.	Uncharacterized protein.	0.472
AO090003000251	AO090026000421	Q2ULV6	Q2UEZ1	Ldi domain-containing protein.	Uncharacterized protein.	0.538
AO090003001143	AO090003000251	Q2UJN1	Q2ULV6	Amino_oxidase domain-containing protein.	Ldi domain-containing protein.	0.538
AO090003001143	AO090005001272	Q2UJN1	Q2UQF5	Amino_oxidase domain-containing protein.	Uncharacterized protein.	0.412
AO090003001143	AO090020000180	Q2UJN1	Q2U4W1	Amino_oxidase domain-containing protein.	Thioredoxin domain-containing protein.	0.538
AO090003001143	AO090023000377	Q2UJN1	Q2UHN5	Amino_oxidase domain-containing protein.	Ldi domain-containing protein.	0.538
AO090003001143	AO090023000378	Q2UJN1	Q2UHN4	Amino_oxidase domain-containing protein.	Ldi domain-containing protein.	0.538
AO090003001143	AO090026000421	Q2UJN1	Q2UEZ1	Amino_oxidase domain-containing protein.	Uncharacterized protein.	0.521
AO090005001272	AO090003000251	Q2UQF5	Q2ULV6	Uncharacterized protein.	Ldi domain-containing protein.	0.472
AO090005001272	AO090003001143	Q2UQF5	Q2UJN1	Uncharacterized protein.	Amino_oxidase domain-containing protein.	0.412
AO090005001272	AO090020000180	Q2UQF5	Q2U4W1	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.698
AO090005001272	AO090023000377	Q2UQF5	Q2UHN5	Uncharacterized protein.	Ldi domain-containing protein.	0.472
AO090005001272	AO090023000378	Q2UQF5	Q2UHN4	Uncharacterized protein.	Ldi domain-containing protein.	0.472
AO090005001272	AO090026000421	Q2UQF5	Q2UEZ1	Uncharacterized protein.	Uncharacterized protein.	0.449
AO090009000330	AO090012000170	Q2UUF9	Q2UDH5	Uncharacterized protein.	Plastocyanin-like domain-containing protein.	0.584
AO090011000755	AO090012000170	Q2TZR1	Q2UDH5	Uncharacterized protein; Belongs to the multicopper oxidase family.	Plastocyanin-like domain-containing protein.	0.448
AO090012000170	AO090009000330	Q2UDH5	Q2UUF9	Plastocyanin-like domain-containing protein.	Uncharacterized protein.	0.584
AO090012000170	AO090011000755	Q2UDH5	Q2TZR1	Plastocyanin-like domain-containing protein.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.448
AO090012000170	AO090102000546	Q2UDH5	Q2UA47	Plastocyanin-like domain-containing protein.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.448