14 items (Aspergillus oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AO090005000100	Uncharacterized protein. (134 aa)
	AO090005000882	Uncharacterized protein. (609 aa)
	AO090001000378	Uncharacterized protein. (153 aa)
	AO090003000102	DNL-type domain-containing protein. (194 aa)
	AO090003000215	Uncharacterized protein. (124 aa)
	AO090023000133	Uncharacterized protein. (214 aa)
	AO090023000476	Uncharacterized protein. (170 aa)
	AO090026000264	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. (247 aa)
	AO090701000026	Uncharacterized protein. (355 aa)
	AO090701000781	Uncharacterized protein. (632 aa)
	AO090120000245	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (523 aa)
	AO090011000534	Uncharacterized protein. (108 aa)
	AO090038000455	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family. (518 aa)
	AO090011000653	Uncharacterized protein. (236 aa)

Your Current Organism:

Aspergillus oryzae

NCBI taxonomy Id: 510516
Other names: A. oryzae RIB40, Aspergillus oryzae RIB40

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AO090001000378	AO090003000215	Q2UNG3	Q2ULY8	Uncharacterized protein.	Uncharacterized protein.	0.629
AO090001000378	AO090005000100	Q2UNG3	Q2UTA1	Uncharacterized protein.	Uncharacterized protein.	0.660
AO090001000378	AO090011000534	Q2UNG3	Q2U095	Uncharacterized protein.	Uncharacterized protein.	0.521
AO090001000378	AO090011000653	Q2UNG3	Q2TZZ7	Uncharacterized protein.	Uncharacterized protein.	0.794
AO090001000378	AO090023000133	Q2UNG3	Q2UIA4	Uncharacterized protein.	Uncharacterized protein.	0.877
AO090001000378	AO090023000476	Q2UNG3	Q2UHE8	Uncharacterized protein.	Uncharacterized protein.	0.982
AO090001000378	AO090038000455	Q2UNG3	Q2U2H4	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	0.743
AO090001000378	AO090120000245	Q2UNG3	Q2U6G6	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.689
AO090001000378	AO090701000026	Q2UNG3	Q2U9H8	Uncharacterized protein.	Uncharacterized protein.	0.998
AO090001000378	AO090701000781	Q2UNG3	Q2U7M4	Uncharacterized protein.	Uncharacterized protein.	0.968
AO090003000102	AO090003000215	Q2UM82	Q2ULY8	DNL-type domain-containing protein.	Uncharacterized protein.	0.466
AO090003000102	AO090005000100	Q2UM82	Q2UTA1	DNL-type domain-containing protein.	Uncharacterized protein.	0.530
AO090003000102	AO090026000264	Q2UM82	Q2UFC0	DNL-type domain-containing protein.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.525
AO090003000102	AO090038000455	Q2UM82	Q2U2H4	DNL-type domain-containing protein.	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	0.464
AO090003000102	AO090701000026	Q2UM82	Q2U9H8	DNL-type domain-containing protein.	Uncharacterized protein.	0.451
AO090003000215	AO090001000378	Q2ULY8	Q2UNG3	Uncharacterized protein.	Uncharacterized protein.	0.629
AO090003000215	AO090003000102	Q2ULY8	Q2UM82	Uncharacterized protein.	DNL-type domain-containing protein.	0.466
AO090003000215	AO090005000100	Q2ULY8	Q2UTA1	Uncharacterized protein.	Uncharacterized protein.	0.955
AO090003000215	AO090011000534	Q2ULY8	Q2U095	Uncharacterized protein.	Uncharacterized protein.	0.678
AO090003000215	AO090011000653	Q2ULY8	Q2TZZ7	Uncharacterized protein.	Uncharacterized protein.	0.956