11 items (Aspergillus oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AO090010000757	Uncharacterized protein. (398 aa)
	AO090010000482	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (517 aa)
	AO090011000593	CDH-cyt domain-containing protein. (442 aa)
	AO090701000371	Uncharacterized protein. (289 aa)
	AO090102000349	Uncharacterized protein. (606 aa)
	AO090102000303	Uncharacterized protein. (244 aa)
	AO090026000372	Uncharacterized protein. (226 aa)
	AO090003000607	Uncharacterized protein. (122 aa)
	AO090005000749	ATP synthase subunit gamma. (290 aa)
	AO090005000617	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (556 aa)
	AO090005000604	Uncharacterized protein. (236 aa)

Your Current Organism:

Aspergillus oryzae

NCBI taxonomy Id: 510516
Other names: A. oryzae RIB40, Aspergillus oryzae RIB40

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AO090003000607	AO090005000604	Q2UKZ6	Q2US19	Uncharacterized protein.	Uncharacterized protein.	0.926
AO090003000607	AO090005000617	Q2UKZ6	Q2US06	Uncharacterized protein.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.856
AO090003000607	AO090005000749	Q2UKZ6	Q2URN9	Uncharacterized protein.	ATP synthase subunit gamma.	0.904
AO090003000607	AO090010000482	Q2UKZ6	Q2TWP0	Uncharacterized protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.867
AO090003000607	AO090026000372	Q2UKZ6	Q2UF30	Uncharacterized protein.	Uncharacterized protein.	0.922
AO090003000607	AO090102000303	Q2UKZ6	Q2UAP4	Uncharacterized protein.	Uncharacterized protein.	0.662
AO090003000607	AO090701000371	Q2UKZ6	Q2U8M4	Uncharacterized protein.	Uncharacterized protein.	0.662
AO090005000604	AO090003000607	Q2US19	Q2UKZ6	Uncharacterized protein.	Uncharacterized protein.	0.926
AO090005000604	AO090005000617	Q2US19	Q2US06	Uncharacterized protein.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
AO090005000604	AO090005000749	Q2US19	Q2URN9	Uncharacterized protein.	ATP synthase subunit gamma.	0.999
AO090005000604	AO090010000482	Q2US19	Q2TWP0	Uncharacterized protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
AO090005000604	AO090010000757	Q2US19	Q2TVZ9	Uncharacterized protein.	Uncharacterized protein.	0.889
AO090005000604	AO090011000593	Q2US19	Q2U046	Uncharacterized protein.	CDH-cyt domain-containing protein.	0.889
AO090005000604	AO090026000372	Q2US19	Q2UF30	Uncharacterized protein.	Uncharacterized protein.	0.999
AO090005000604	AO090102000303	Q2US19	Q2UAP4	Uncharacterized protein.	Uncharacterized protein.	0.922
AO090005000604	AO090701000371	Q2US19	Q2U8M4	Uncharacterized protein.	Uncharacterized protein.	0.922
AO090005000617	AO090003000607	Q2US06	Q2UKZ6	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.856
AO090005000617	AO090005000604	Q2US06	Q2US19	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.999
AO090005000617	AO090005000749	Q2US06	Q2URN9	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit gamma.	0.999
AO090005000617	AO090010000482	Q2US06	Q2TWP0	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999