30 items (Aspergillus oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AO090003001489	4Fe-4S Mo/W bis-MGD-type domain-containing protein. (729 aa)
	AO090023000127	Uncharacterized protein. (615 aa)
	AO090003000474	Rieske domain-containing protein. (523 aa)
	AO090010000053	Uncharacterized protein. (578 aa)
	AO090010000061	Helo_like_N domain-containing protein. (343 aa)
	AO090010000155	Uncharacterized protein. (496 aa)
	AO090010000475	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (237 aa)
	AO090010000505	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (278 aa)
	AO090003001099	Uncharacterized protein. (1359 aa)
	AO090003001146	Fe-S_biosyn domain-containing protein. (237 aa)
	AO090003001160	Uncharacterized protein. (133 aa)
	AO090023000909	NifU_N domain-containing protein. (190 aa)
	AO090023001002	Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. (151 aa)
	AO090026000253	Uncharacterized protein. (483 aa)
	AO090012000414	Uncharacterized protein. (297 aa)
	AO090012000624	Rieske domain-containing protein. (1097 aa)
	AO090012000890	Uncharacterized protein. (596 aa)
	AO090102000110	Uncharacterized protein. (401 aa)
	AO090102000231	Uncharacterized protein. (575 aa)
	AO090102000595	2Fe-2S ferredoxin-type domain-containing protein. (210 aa)
	AO090102000645	Uncharacterized protein. (746 aa)
	AO090701000175	Uncharacterized protein. (559 aa)
	AO090120000059	Uncharacterized protein. (178 aa)
	AO090120000060	Uncharacterized protein. (324 aa)
	dre2	Fe-S cluster assembly protein dre2; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the scaffold complex cfd1-nbp35. Electrons are transferred to dre2 from NADPH via the FAD- and FMN-containing protein tah18. Tah18-dre2 are also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RNR), probably by [...] (313 aa)
	AO090038000584	Rieske domain-containing protein. (559 aa)
	AO090011000782	Uncharacterized protein. (270 aa)
	AO090009000151	Uncharacterized protein; Belongs to the BolA/IbaG family. (191 aa)
	AO090009000248	Uncharacterized protein. (294 aa)
	AO090009000414	Uncharacterized protein. (608 aa)

Your Current Organism:

Aspergillus oryzae

NCBI taxonomy Id: 510516
Other names: A. oryzae RIB40, Aspergillus oryzae RIB40

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AO090003000474	AO090003001146	Q2ULB4	Q2UJM8	Rieske domain-containing protein.	Fe-S_biosyn domain-containing protein.	0.428
AO090003000474	AO090003001160	Q2ULB4	Q2UJL7	Rieske domain-containing protein.	Uncharacterized protein.	0.420
AO090003000474	AO090003001489	Q2ULB4	Q2UIT4	Rieske domain-containing protein.	4Fe-4S Mo/W bis-MGD-type domain-containing protein.	0.928
AO090003000474	AO090009000248	Q2ULB4	Q2UUN2	Rieske domain-containing protein.	Uncharacterized protein.	0.545
AO090003000474	AO090010000061	Q2ULB4	Q2TXP8	Rieske domain-containing protein.	Helo_like_N domain-containing protein.	0.947
AO090003000474	AO090010000505	Q2ULB4	Q2TWM0	Rieske domain-containing protein.	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.935
AO090003000474	AO090011000782	Q2ULB4	Q2TZN8	Rieske domain-containing protein.	Uncharacterized protein.	0.947
AO090003000474	AO090102000595	Q2ULB4	Q2UA03	Rieske domain-containing protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.545
AO090003000474	AO090102000645	Q2ULB4	Q2U9W0	Rieske domain-containing protein.	Uncharacterized protein.	0.928
AO090003001146	AO090003000474	Q2UJM8	Q2ULB4	Fe-S_biosyn domain-containing protein.	Rieske domain-containing protein.	0.428
AO090003001146	AO090003001160	Q2UJM8	Q2UJL7	Fe-S_biosyn domain-containing protein.	Uncharacterized protein.	0.609
AO090003001146	AO090009000151	Q2UJM8	Q2UUW1	Fe-S_biosyn domain-containing protein.	Uncharacterized protein; Belongs to the BolA/IbaG family.	0.434
AO090003001146	AO090009000248	Q2UJM8	Q2UUN2	Fe-S_biosyn domain-containing protein.	Uncharacterized protein.	0.557
AO090003001146	AO090010000475	Q2UJM8	Q2TWP6	Fe-S_biosyn domain-containing protein.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.452
AO090003001146	AO090010000505	Q2UJM8	Q2TWM0	Fe-S_biosyn domain-containing protein.	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.400
AO090003001146	AO090012000414	Q2UJM8	Q2UCX0	Fe-S_biosyn domain-containing protein.	Uncharacterized protein.	0.806
AO090003001146	AO090023000909	Q2UJM8	Q2UGB1	Fe-S_biosyn domain-containing protein.	NifU_N domain-containing protein.	0.843
AO090003001146	AO090023001002	Q2UJM8	Q2UG28	Fe-S_biosyn domain-containing protein.	Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.	0.807
AO090003001146	AO090102000110	Q2UJM8	Q2UB49	Fe-S_biosyn domain-containing protein.	Uncharacterized protein.	0.979
AO090003001146	AO090102000595	Q2UJM8	Q2UA03	Fe-S_biosyn domain-containing protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.685