11 items (Aspergillus oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AO090026000651	Uncharacterized protein. (208 aa)
	AO090005000817	Uncharacterized protein. (341 aa)
	AO090005000888	Cytochrome c domain-containing protein. (316 aa)
	AO090005000890	Uncharacterized protein. (153 aa)
	AO090005001272	Uncharacterized protein. (115 aa)
	AO090001000498	Uncharacterized protein. (120 aa)
	AO090003000474	Rieske domain-containing protein. (523 aa)
	AO090003001082	UCR_hinge domain-containing protein. (205 aa)
	AO090011000580	Uncharacterized protein. (116 aa)
	AO090010000475	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (237 aa)
	AO090010000481	Uncharacterized protein. (197 aa)

Your Current Organism:

Aspergillus oryzae

NCBI taxonomy Id: 510516
Other names: A. oryzae RIB40, Aspergillus oryzae RIB40

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AO090001000498	AO090003000474	Q2UN56	Q2ULB4	Uncharacterized protein.	Rieske domain-containing protein.	0.979
AO090001000498	AO090003001082	Q2UN56	Q2UJT5	Uncharacterized protein.	UCR_hinge domain-containing protein.	0.998
AO090001000498	AO090005000817	Q2UN56	Q2URI3	Uncharacterized protein.	Uncharacterized protein.	0.984
AO090001000498	AO090005000888	Q2UN56	Q2URC0	Uncharacterized protein.	Cytochrome c domain-containing protein.	0.998
AO090001000498	AO090005000890	Q2UN56	Q2URB9	Uncharacterized protein.	Uncharacterized protein.	0.984
AO090001000498	AO090005001272	Q2UN56	Q2UQF5	Uncharacterized protein.	Uncharacterized protein.	0.999
AO090001000498	AO090010000475	Q2UN56	Q2TWP6	Uncharacterized protein.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.999
AO090001000498	AO090010000481	Q2UN56	Q2TWP1	Uncharacterized protein.	Uncharacterized protein.	0.997
AO090001000498	AO090011000580	Q2UN56	Q2U055	Uncharacterized protein.	Uncharacterized protein.	0.998
AO090001000498	AO090026000651	Q2UN56	Q2UEE5	Uncharacterized protein.	Uncharacterized protein.	0.999
AO090003000474	AO090001000498	Q2ULB4	Q2UN56	Rieske domain-containing protein.	Uncharacterized protein.	0.979
AO090003000474	AO090003001082	Q2ULB4	Q2UJT5	Rieske domain-containing protein.	UCR_hinge domain-containing protein.	0.920
AO090003000474	AO090005000817	Q2ULB4	Q2URI3	Rieske domain-containing protein.	Uncharacterized protein.	0.920
AO090003000474	AO090005000888	Q2ULB4	Q2URC0	Rieske domain-containing protein.	Cytochrome c domain-containing protein.	0.959
AO090003000474	AO090005000890	Q2ULB4	Q2URB9	Rieske domain-containing protein.	Uncharacterized protein.	0.959
AO090003000474	AO090005001272	Q2ULB4	Q2UQF5	Rieske domain-containing protein.	Uncharacterized protein.	0.942
AO090003000474	AO090010000481	Q2ULB4	Q2TWP1	Rieske domain-containing protein.	Uncharacterized protein.	0.965
AO090003000474	AO090011000580	Q2ULB4	Q2U055	Rieske domain-containing protein.	Uncharacterized protein.	0.891
AO090003000474	AO090026000651	Q2ULB4	Q2UEE5	Rieske domain-containing protein.	Uncharacterized protein.	0.980
AO090003001082	AO090001000498	Q2UJT5	Q2UN56	UCR_hinge domain-containing protein.	Uncharacterized protein.	0.998