5 items (Aspergillus oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AO090003001489	4Fe-4S Mo/W bis-MGD-type domain-containing protein. (729 aa)
	AO090038000603	Uncharacterized protein. (232 aa)
	AO090038000615	Uncharacterized protein. (154 aa)
	AO090005001391	Uncharacterized protein. (119 aa)
	AO090003001313	zf-CHCC domain-containing protein. (215 aa)

Your Current Organism:

Aspergillus oryzae

NCBI taxonomy Id: 510516
Other names: A. oryzae RIB40, Aspergillus oryzae RIB40

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AO090003001313	AO090003001489	Q2UJ91	Q2UIT4	zf-CHCC domain-containing protein.	4Fe-4S Mo/W bis-MGD-type domain-containing protein.	0.964
AO090003001313	AO090005001391	Q2UJ91	Q2UQ49	zf-CHCC domain-containing protein.	Uncharacterized protein.	0.999
AO090003001313	AO090038000603	Q2UJ91	Q2U249	zf-CHCC domain-containing protein.	Uncharacterized protein.	0.981
AO090003001313	AO090038000615	Q2UJ91	Q2U237	zf-CHCC domain-containing protein.	Uncharacterized protein.	0.981
AO090003001489	AO090003001313	Q2UIT4	Q2UJ91	4Fe-4S Mo/W bis-MGD-type domain-containing protein.	zf-CHCC domain-containing protein.	0.964
AO090003001489	AO090005001391	Q2UIT4	Q2UQ49	4Fe-4S Mo/W bis-MGD-type domain-containing protein.	Uncharacterized protein.	0.946
AO090003001489	AO090038000603	Q2UIT4	Q2U249	4Fe-4S Mo/W bis-MGD-type domain-containing protein.	Uncharacterized protein.	0.900
AO090003001489	AO090038000615	Q2UIT4	Q2U237	4Fe-4S Mo/W bis-MGD-type domain-containing protein.	Uncharacterized protein.	0.900
AO090005001391	AO090003001313	Q2UQ49	Q2UJ91	Uncharacterized protein.	zf-CHCC domain-containing protein.	0.999
AO090005001391	AO090003001489	Q2UQ49	Q2UIT4	Uncharacterized protein.	4Fe-4S Mo/W bis-MGD-type domain-containing protein.	0.946
AO090005001391	AO090038000603	Q2UQ49	Q2U249	Uncharacterized protein.	Uncharacterized protein.	0.984
AO090005001391	AO090038000615	Q2UQ49	Q2U237	Uncharacterized protein.	Uncharacterized protein.	0.984
AO090038000603	AO090003001313	Q2U249	Q2UJ91	Uncharacterized protein.	zf-CHCC domain-containing protein.	0.981
AO090038000603	AO090003001489	Q2U249	Q2UIT4	Uncharacterized protein.	4Fe-4S Mo/W bis-MGD-type domain-containing protein.	0.900
AO090038000603	AO090005001391	Q2U249	Q2UQ49	Uncharacterized protein.	Uncharacterized protein.	0.984
AO090038000615	AO090003001313	Q2U237	Q2UJ91	Uncharacterized protein.	zf-CHCC domain-containing protein.	0.981
AO090038000615	AO090003001489	Q2U237	Q2UIT4	Uncharacterized protein.	4Fe-4S Mo/W bis-MGD-type domain-containing protein.	0.900
AO090038000615	AO090005001391	Q2U237	Q2UQ49	Uncharacterized protein.	Uncharacterized protein.	0.984