5 items (Aspergillus oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AO090103000492	AP_endonuc_2 domain-containing protein. (331 aa)
	AO090103000429	AP_endonuc_2 domain-containing protein. (334 aa)
	AO090038000266	AP_endonuc_2 domain-containing protein. (366 aa)
	AO090701000638	AP_endonuc_2 domain-containing protein. (384 aa)
	AO090001000548	AP_endonuc_2 domain-containing protein. (343 aa)

Your Current Organism:

Aspergillus oryzae

NCBI taxonomy Id: 510516
Other names: A. oryzae RIB40, Aspergillus oryzae RIB40

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AO090038000266	AO090103000429	Q2U2Y7	Q2TY15	AP_endonuc_2 domain-containing protein.	AP_endonuc_2 domain-containing protein.	0.902
AO090038000266	AO090701000638	Q2U2Y7	Q2U7Z3	AP_endonuc_2 domain-containing protein.	AP_endonuc_2 domain-containing protein.	0.905
AO090103000429	AO090038000266	Q2TY15	Q2U2Y7	AP_endonuc_2 domain-containing protein.	AP_endonuc_2 domain-containing protein.	0.902
AO090103000429	AO090701000638	Q2TY15	Q2U7Z3	AP_endonuc_2 domain-containing protein.	AP_endonuc_2 domain-containing protein.	0.905
AO090701000638	AO090038000266	Q2U7Z3	Q2U2Y7	AP_endonuc_2 domain-containing protein.	AP_endonuc_2 domain-containing protein.	0.905
AO090701000638	AO090103000429	Q2U7Z3	Q2TY15	AP_endonuc_2 domain-containing protein.	AP_endonuc_2 domain-containing protein.	0.905