29 items (Aspergillus oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AO090010000019	Uncharacterized protein. (216 aa)
	AO090103000005	Thioredoxin-like_fold domain-containing protein. (208 aa)
	AO090020000180	Thioredoxin domain-containing protein. (322 aa)
	AO090020000116	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (321 aa)
	AO090120000100	Uncharacterized protein. (626 aa)
	AO090701000345	SGNH_hydro domain-containing protein. (442 aa)
	AO090701000133	Uncharacterized protein. (277 aa)
	AO090102000038	Uncharacterized protein. (269 aa)
	AO090026000651	Uncharacterized protein. (208 aa)
	AO090026000421	Uncharacterized protein. (224 aa)
	AO090026000266	Uncharacterized protein. (632 aa)
	AO090026000056	GH16 domain-containing protein. (443 aa)
	AO090023000378	Ldi domain-containing protein. (278 aa)
	AO090023000377	Ldi domain-containing protein. (221 aa)
	AO090003001143	Amino_oxidase domain-containing protein. (389 aa)
	AO090003000373	WD_REPEATS_REGION domain-containing protein. (458 aa)
	AO090003000251	Ldi domain-containing protein. (559 aa)
	AO090001000721	Uncharacterized protein. (423 aa)
	AO090001000522	Uncharacterized protein. (240 aa)
	AO090001000489	Uncharacterized protein. (369 aa)
	AO090005001344	Glycosidase; Belongs to the glycosyl hydrolase 16 family. (362 aa)
	AO090005001272	Uncharacterized protein. (115 aa)
	AO090005001090	Glycosidase; Belongs to the glycosyl hydrolase 16 family. (445 aa)
	AO090005000613	FAS1 domain-containing protein. (174 aa)
	AO090005000589	HDAC_interact domain-containing protein. (1525 aa)
	AO090005000560	GH16 domain-containing protein. (341 aa)
	AO090010000481	Uncharacterized protein. (197 aa)
	AO090010000266	Uncharacterized protein. (145 aa)
	AO090010000018	Uncharacterized protein. (141 aa)

Your Current Organism:

Aspergillus oryzae

NCBI taxonomy Id: 510516
Other names: A. oryzae RIB40, Aspergillus oryzae RIB40

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AO090001000489	AO090005001272	Q2UN64	Q2UQF5	Uncharacterized protein.	Uncharacterized protein.	0.451
AO090001000489	AO090020000116	Q2UN64	Q2U516	Uncharacterized protein.	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	0.469
AO090001000489	AO090020000180	Q2UN64	Q2U4W1	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.486
AO090001000489	AO090026000421	Q2UN64	Q2UEZ1	Uncharacterized protein.	Uncharacterized protein.	0.613
AO090001000489	AO090701000133	Q2UN64	Q2U984	Uncharacterized protein.	Uncharacterized protein.	0.441
AO090001000522	AO090001000721	Q2UN34	Q2UMK4	Uncharacterized protein.	Uncharacterized protein.	0.544
AO090001000522	AO090003000373	Q2UN34	Q2ULK7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.662
AO090001000721	AO090001000522	Q2UMK4	Q2UN34	Uncharacterized protein.	Uncharacterized protein.	0.544
AO090001000721	AO090003000373	Q2UMK4	Q2ULK7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.940
AO090001000721	AO090005000589	Q2UMK4	Q2US33	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.563
AO090001000721	AO090005000613	Q2UMK4	Q2US10	Uncharacterized protein.	FAS1 domain-containing protein.	0.563
AO090001000721	AO090010000018	Q2UMK4	Q2TXT6	Uncharacterized protein.	Uncharacterized protein.	0.563
AO090001000721	AO090010000019	Q2UMK4	Q2TXT5	Uncharacterized protein.	Uncharacterized protein.	0.563
AO090001000721	AO090103000005	Q2UMK4	Q2TZ30	Uncharacterized protein.	Thioredoxin-like_fold domain-containing protein.	0.456
AO090003000251	AO090003001143	Q2ULV6	Q2UJN1	Ldi domain-containing protein.	Amino_oxidase domain-containing protein.	0.538
AO090003000251	AO090005001272	Q2ULV6	Q2UQF5	Ldi domain-containing protein.	Uncharacterized protein.	0.472
AO090003000251	AO090020000116	Q2ULV6	Q2U516	Ldi domain-containing protein.	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	0.539
AO090003000251	AO090026000421	Q2ULV6	Q2UEZ1	Ldi domain-containing protein.	Uncharacterized protein.	0.538
AO090003000373	AO090001000522	Q2ULK7	Q2UN34	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.662
AO090003000373	AO090001000721	Q2ULK7	Q2UMK4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.940