4 items (Aspergillus oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AO090023000910	ABC1 domain-containing protein. (622 aa)
	AO090206000031	Protein kinase domain-containing protein. (558 aa)
	AO090701000100	ABC1 domain-containing protein. (733 aa)
	AO090020000131	ABC1 domain-containing protein. (670 aa)

Your Current Organism:

Aspergillus oryzae

NCBI taxonomy Id: 510516
Other names: A. oryzae RIB40, Aspergillus oryzae RIB40

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AO090020000131	AO090206000031	Q2U505	Q2PIW8	ABC1 domain-containing protein.	Protein kinase domain-containing protein.	0.405
AO090023000910	AO090206000031	Q2UGB0	Q2PIW8	ABC1 domain-containing protein.	Protein kinase domain-containing protein.	0.447
AO090206000031	AO090020000131	Q2PIW8	Q2U505	Protein kinase domain-containing protein.	ABC1 domain-containing protein.	0.405
AO090206000031	AO090023000910	Q2PIW8	Q2UGB0	Protein kinase domain-containing protein.	ABC1 domain-containing protein.	0.447
AO090206000031	AO090701000100	Q2PIW8	Q2U9B2	Protein kinase domain-containing protein.	ABC1 domain-containing protein.	0.591
AO090701000100	AO090206000031	Q2U9B2	Q2PIW8	ABC1 domain-containing protein.	Protein kinase domain-containing protein.	0.591