90 items (Alcaligenes faecalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALO36867.1	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (585 aa)
	ALO36868.1	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)
	ALO37016.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
	ALO37017.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (485 aa)
	ALO37018.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (557 aa)
	rdgC	Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family. (298 aa)
	ALO37042.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
	ALO37043.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
	ALO37108.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
	ALO37109.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)
	ALO37250.1	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
	ALO37251.1	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (1147 aa)
	ALO37255.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
	ALO37256.1	Response regulator receiver protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)
	ALO37257.1	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (568 aa)
	ompR	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
	ALO40246.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (469 aa)
	ALO37474.1	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (467 aa)
	ALO37547.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (930 aa)
	ALO37548.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1047 aa)
	ALO37549.1	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
	ALO37550.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
	ALO37605.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
	ALO37670.1	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
	prpR	Propionate catabolism operon regulatory protein PrpR; Derived by automated computational analysis using gene prediction method: Protein Homology. (638 aa)
	ALO37794.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
	ALO37795.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (481 aa)
	ALO38057.1	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (940 aa)
	ALO38073.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (656 aa)
	ALO38074.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
	ALO38204.1	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
	ALO38360.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
	ALO38428.1	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (529 aa)
	ALO38429.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (538 aa)
	ALO38435.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (600 aa)
	ALO38497.1	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (852 aa)
	rpoN	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (461 aa)
	ALO38721.1	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (455 aa)
	ALO38763.1	Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
	ALO40380.1	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (612 aa)
	ALO40382.1	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (809 aa)
	ALO38882.1	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (650 aa)
	ALO38900.1	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (528 aa)
	ALO39030.1	Two-component system response regulator; Transcriptional activator of tricarboxylate transport system genes; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
	ALO39031.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)
	ALO39095.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)
	ALO39096.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
	phoR	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)
	phoB	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
	norR	Transcriptional regulator; Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; Derived by automated computational analysis using gene prediction method: Protein Homology. (513 aa)
	ALO39207.1	Two-component response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
	ALO39254.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
	ALO39255.1	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)
	ALO39277.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)
	ALO39278.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
	rpoN-2	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (362 aa)
	ALO40433.1	Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
	ALO39354.1	C4-dicarboxylate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (600 aa)
	ALO39355.1	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (446 aa)
	ALO39404.1	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)
	ALO39448.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
	rppH	RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. (188 aa)
	ALO39482.1	Two-component system response regulator; Transcriptional activator of tricarboxylate transport system genes; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
	ALO39483.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (507 aa)
	ALO39530.1	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. (699 aa)
	ALO39531.1	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)
	ALO39532.1	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (578 aa)
	ALO39533.1	Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. (276 aa)
	cheB	Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (352 aa)
	ALO39535.1	Two-component system response regulator; Chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)
	ALO39536.1	Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). (213 aa)
	ALO39554.1	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)
	ALO39556.1	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (568 aa)
	ALO39590.1	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (551 aa)
	ALO39591.1	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (576 aa)
	ALO39636.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (453 aa)
	ALO39637.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
	ALO39674.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
	ALO39675.1	Response regulator receiver protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (988 aa)
	ALO39716.1	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (486 aa)
	ALO40480.1	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (569 aa)
	ALO39856.1	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)
	ALO39857.1	PhoB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
	ALO39918.1	Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	ALO39935.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (845 aa)
	ALO39936.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
	ALO39959.1	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (567 aa)
	ALO40014.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
	ALO40186.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)
	ALO40516.1	Two-component sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (630 aa)

Your Current Organism:

Alcaligenes faecalis

NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Achromobacter sp. ATCC8750, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALO36867.1	ALO36868.1	UZ73_00510	UZ73_00515	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
ALO36867.1	ALO37016.1	UZ73_00510	UZ73_01300	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
ALO36867.1	ALO37017.1	UZ73_00510	UZ73_01305	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
ALO36867.1	ALO37042.1	UZ73_00510	UZ73_01455	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.898
ALO36867.1	ALO37043.1	UZ73_00510	UZ73_01460	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.798
ALO36867.1	ALO37108.1	UZ73_00510	UZ73_01845	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
ALO36867.1	ALO37109.1	UZ73_00510	UZ73_01850	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.799
ALO36867.1	ALO37250.1	UZ73_00510	UZ73_02590	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.652
ALO36867.1	ALO37251.1	UZ73_00510	UZ73_02595	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ALO36867.1	ALO37255.1	UZ73_00510	UZ73_02615	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.809
ALO36867.1	ALO37256.1	UZ73_00510	UZ73_02620	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Response regulator receiver protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.870
ALO36867.1	ALO37257.1	UZ73_00510	UZ73_02625	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.841
ALO36867.1	ALO37474.1	UZ73_00510	UZ73_03850	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.685
ALO36867.1	ALO37547.1	UZ73_00510	UZ73_04290	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
ALO36867.1	ALO37548.1	UZ73_00510	UZ73_04295	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.706
ALO36867.1	ALO37549.1	UZ73_00510	UZ73_04300	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.652
ALO36867.1	ALO37794.1	UZ73_00510	UZ73_05670	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.758
ALO36867.1	ALO37795.1	UZ73_00510	UZ73_05675	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.760
ALO36867.1	ALO38057.1	UZ73_00510	UZ73_07155	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
ALO36867.1	ALO38073.1	UZ73_00510	UZ73_07265	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.692

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