STRINGSTRING
benD benD ALO40131.1 ALO40131.1 ALO40086.1 ALO40086.1 ALO40040.1 ALO40040.1 ALO39969.1 ALO39969.1 benB benB ALO39965.1 ALO39965.1 ALO39964.1 ALO39964.1 ALO39963.1 ALO39963.1 ALO39962.1 ALO39962.1 ALO39961.1 ALO39961.1 ALO39960.1 ALO39960.1 catC catC pcaD pcaD ALO39907.1 ALO39907.1 ALO39897.1 ALO39897.1 ALO39865.1 ALO39865.1 ALO39825.1 ALO39825.1 ALO40476.1 ALO40476.1 ALO39723.1 ALO39723.1 ALO39664.1 ALO39664.1 ALO39499.1 ALO39499.1 ALO39384.1 ALO39384.1 ALO39383.1 ALO39383.1 ALO39343.1 ALO39343.1 ALO39296.1 ALO39296.1 ubiX ubiX ALO38903.1 ALO38903.1 ALO38856.1 ALO38856.1 ALO38745.1 ALO38745.1 ALO38622.1 ALO38622.1 ALO38541.1 ALO38541.1 ALO38385.1 ALO38385.1 ALO38330.1 ALO38330.1 dkgB dkgB ALO38276.1 ALO38276.1 ALO38265.1 ALO38265.1 ALO38226.1 ALO38226.1 ALO38203.1 ALO38203.1 ALO38169.1 ALO38169.1 ALO38155.1 ALO38155.1 ALO38042.1 ALO38042.1 ALO37746.1 ALO37746.1 dmpG dmpG ALO37539.1 ALO37539.1 ALO37537.1 ALO37537.1 ALO37535.1 ALO37535.1 ALO37534.1 ALO37534.1 ALO40265.1 ALO40265.1 ALO37533.1 ALO37533.1 ALO37441.1 ALO37441.1 ALO37309.1 ALO37309.1 ALO37292.1 ALO37292.1 ALO37277.1 ALO37277.1 ALO37153.1 ALO37153.1 ALO36970.1 ALO36970.1 ALO36886.1 ALO36886.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
benD1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Catalyzes the degradation of 2-hydro-1,2-dihydroxy benzoate to catechol; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (256 aa)
ALO40131.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)
ALO40086.1Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
ALO40040.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
ALO39969.1NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
benBBenzoate 1,2-dioxygenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)
ALO39965.1Phenol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)
ALO39964.1Phenol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa)
ALO39963.1Phenol 2-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (501 aa)
ALO39962.1Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)
ALO39961.1Phenol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
ALO39960.1Phenol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)
catCMuconolactone delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the muconolactone Delta-isomerase family. (91 aa)
pcaD3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
ALO39907.1Muconate cycloisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (396 aa)
ALO39897.1Alkylhydroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)
ALO39865.1Tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)
ALO39825.1Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
ALO40476.1Carnitine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family. (403 aa)
ALO39723.1Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (196 aa)
ALO39664.1Aromatic-ring-hydroxylating dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)
ALO39499.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
ALO39384.1Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)
ALO39383.13-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa)
ALO39343.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)
ALO39296.1NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. (340 aa)
ubiX3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (183 aa)
ALO38903.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
ALO38856.1S-(hydroxymethyl)glutathione dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (368 aa)
ALO38745.1Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (186 aa)
ALO38622.1Phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
ALO38541.1Carnitine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family. (403 aa)
ALO38385.12-oxopent-4-enoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)
ALO38330.1Carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (174 aa)
dkgBCatalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
ALO38276.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
ALO38265.1Transcriptional regulator; Represses the lctPRD operon; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
ALO38226.1Carboxymuconolactone decarboxylase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (180 aa)
ALO38203.12-hydroxychromene-2-carboxylate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)
ALO38169.14-oxalocrotonate tautomerase; 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. (61 aa)
ALO38155.1FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (557 aa)
ALO38042.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
ALO37746.1Transcriptional regulator; Represses the lctPRD operon; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
dmpG4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family. (344 aa)
ALO37539.1Acetaldehyde dehydrogenase (acetylating); Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. (315 aa)
ALO37537.12-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
ALO37535.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
ALO37534.1Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase; Converts cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol) into 3-(2,3-dihydroxylphenyl)propionate; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
ALO40265.13-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)
ALO37533.13-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)
ALO37441.1NAD(P)H-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
ALO37309.1Quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
ALO37292.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
ALO37277.1Acetyl esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
ALO37153.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)
ALO36970.1Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (143 aa)
ALO36886.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Achromobacter sp. ATCC8750, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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