Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroM | yfgI | b0390 | b2506 | AroM family protein; This protein of unknown function is encoded by a gene that cotranscribes with the aroL gene, which codes for shikimate kinase II. | Nalidixic acid resistance protein, putative periplasmic protein; Putative membrane protein. | 0.801 |
| yceK | yfgH | b1050 | b2505 | Outer membrane integrity lipoprotein; To E.coli YidQ. | Putative outer membrane lipoprotein. | 0.802 |
| yeeO | yehE | b1985 | b2112 | Putative multdrug exporter, MATE family; A transporter able to export peptides and flavins. When overexpressed allows cells deleted for multiple peptidases (pepA, pepB, pepD and pepN) to grow in the presence of dipeptides Ala-Gln or Gly-Tyr which otherwise inhibit growth. Cells overexpressing this protein have decreased intracellular levels of Ala-Gln dipeptide, and in a system that produces the Ala-Gln dipeptide, overproduction of this protein increases its export. When overexpressed increases secretion of FMN and FAD but not riboflavin; intracellular concentrations of FMN and ribofla [...] | DUF2574 family protein. | 0.648 |
| yehE | yeeO | b2112 | b1985 | DUF2574 family protein. | Putative multdrug exporter, MATE family; A transporter able to export peptides and flavins. When overexpressed allows cells deleted for multiple peptidases (pepA, pepB, pepD and pepN) to grow in the presence of dipeptides Ala-Gln or Gly-Tyr which otherwise inhibit growth. Cells overexpressing this protein have decreased intracellular levels of Ala-Gln dipeptide, and in a system that produces the Ala-Gln dipeptide, overproduction of this protein increases its export. When overexpressed increases secretion of FMN and FAD but not riboflavin; intracellular concentrations of FMN and ribofla [...] | 0.648 |
| yehE | yfgI | b2112 | b2506 | DUF2574 family protein. | Nalidixic acid resistance protein, putative periplasmic protein; Putative membrane protein. | 0.645 |
| yfgH | yceK | b2505 | b1050 | Putative outer membrane lipoprotein. | Outer membrane integrity lipoprotein; To E.coli YidQ. | 0.802 |
| yfgH | yfgI | b2505 | b2506 | Putative outer membrane lipoprotein. | Nalidixic acid resistance protein, putative periplasmic protein; Putative membrane protein. | 0.767 |
| yfgI | aroM | b2506 | b0390 | Nalidixic acid resistance protein, putative periplasmic protein; Putative membrane protein. | AroM family protein; This protein of unknown function is encoded by a gene that cotranscribes with the aroL gene, which codes for shikimate kinase II. | 0.801 |
| yfgI | yehE | b2506 | b2112 | Nalidixic acid resistance protein, putative periplasmic protein; Putative membrane protein. | DUF2574 family protein. | 0.645 |
| yfgI | yfgH | b2506 | b2505 | Nalidixic acid resistance protein, putative periplasmic protein; Putative membrane protein. | Putative outer membrane lipoprotein. | 0.767 |